RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 GTF3C4Q9UKN8 822 aa13.65□□□□□ -0.22
CLP1-202ENST00000525602 CDH9Q9ULB4 789 aa13.65□□□□□ -0.22
CLP1-202ENST00000525602 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
CLP1-202ENST00000525602 PSMA7O14818 248 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 ATP2C2O75185 946 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 EPB41P11171 864 aaKnown RBP13.64□□□□□ -0.23
CLP1-202ENST00000525602 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
CLP1-202ENST00000525602 GJA1P17302 382 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 BMP6P22004 513 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 RFX1P22670 979 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 PPP1R2P41236 205 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 PIK3CAP42336 1068 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 GCLMP48507 274 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 GPR15P49685 360 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 FKBP3Q00688 224 aaKnown RBP13.64□□□□□ -0.23
CLP1-202ENST00000525602 MORC3Q14149 939 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 VEPH1Q14D04 833 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 FAM171BQ6P995 826 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
CLP1-202ENST00000525602 ITIH5Q86UX2 942 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 MYLPFQ96A32 169 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 ELMO3Q96BJ8 720 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 MCRS1Q96EZ8 462 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
CLP1-202ENST00000525602 FOXQ1Q9C009 403 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 SNX25Q9H3E2 840 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 SMYD3Q9H7B4 428 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
CLP1-202ENST00000525602 CRTAC1Q9NQ79 661 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 PATJQ8NI35 1801 aa13.64□□□□□ -0.23
CLP1-202ENST00000525602 PTPRDP23468 1912 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 EPG5Q9HCE0 2579 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 BIN1O00499 593 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 SLC16A3O15427 465 aaKnown RBP13.63□□□□□ -0.23
CLP1-202ENST00000525602 PDGFRBP09619 1106 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 GLULP15104 373 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 CCNE1P24864 410 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 CYP2F1P24903 491 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
CLP1-202ENST00000525602 RAP1GAPP47736 663 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 MCCD1P59942 119 aaPredicted RBP13.63□□□□□ -0.23
CLP1-202ENST00000525602 TEAD2Q15562 447 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 CFAP221Q4G0U5 840 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 C4orf50Q6ZRC1 276 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 CLEC17AQ6ZS10 378 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 SPATA2LQ8IUW3 424 aaPredicted RBP13.63□□□□□ -0.23
CLP1-202ENST00000525602 OR6B3Q8NGW1 331 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 GIPC2Q8TF65 315 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 TAF4BQ92750 862 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 DHTKD1Q96HY7 919 aaPredicted RBP13.63□□□□□ -0.23
CLP1-202ENST00000525602 FUBP3Q96I24 572 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLP1-202ENST00000525602 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 SDCBP2Q9H190 292 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 MMRN2Q9H8L6 949 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 TMEM8AQ9HCN3 771 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 ARHGEF3Q9NR81 526 aa13.63□□□□□ -0.23
CLP1-202ENST00000525602 TPRP12270 2363 aaKnown RBP13.63□□□□□ -0.23
CLP1-202ENST00000525602 A0A1W2PRU2 124 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 ASS1P00966 412 aaKnown RBP13.62□□□□□ -0.23
CLP1-202ENST00000525602 SRFP11831 508 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 FCARP24071 287 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 GTF2H1P32780 548 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 MAPRE1Q15691 268 aaKnown RBP13.62□□□□□ -0.23
CLP1-202ENST00000525602 CAMK4Q16566 473 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 MDH1BQ5I0G3 518 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 SDHAF4Q5VUM1 108 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 SPOPLQ6IQ16 392 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 KLHL10Q6JEL2 608 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 KIAA2013Q8IYS2 634 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 TAS1R2Q8TE23 839 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 RMDN1Q96DB5 314 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 DPEP3Q9H4B8 488 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 WNT16Q9UBV4 365 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
CLP1-202ENST00000525602 CACNA1BQ00975 2339 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 MED19A0JLT2 244 aaPredicted RBP13.61□□□□□ -0.23
CLP1-202ENST00000525602 A8MXQ7 604 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 ECI2O75521 394 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 FGF19O95750 216 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 P4HA1P13674 534 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 HMGA1P17096 107 aaKnown RBP13.61□□□□□ -0.23
CLP1-202ENST00000525602 GABRR2P28476 465 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 MAGEA11P43364 429 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 ASPAP45381 313 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 MXI1P50539 228 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 CDH8P55286 799 aa13.61□□□□□ -0.23
CLP1-202ENST00000525602 RPL10AP62906 217 aaKnown RBP13.61□□□□□ -0.23
CLP1-202ENST00000525602 NOP14P78316 857 aaKnown RBP13.61□□□□□ -0.23
CLP1-202ENST00000525602 FOXK2Q01167 660 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms