RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 NHLH1Q02575 133 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 CTBP1Q13363 440 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 MLC1Q15049 377 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 ARHGAP40Q5TG30 622 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 SYCE2Q6PIF2 218 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 DNAJC5GQ8N7S2 189 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 IL31RAQ8NI17 732 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 KBTBD7Q8WVZ9 684 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 ATG4AQ8WYN0 398 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 MESP1Q9BRJ9 268 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 PTDSS2Q9BVG9 487 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 C22orf23Q9BZE7 217 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 NDRG4Q9ULP0 352 aaKnown RBP5.05□□□□□ -1.6
CD44-217ENST00000525348 MRPS17Q9Y2R5 130 aaKnown RBP5.05□□□□□ -1.6
CD44-217ENST00000525348 TMX2Q9Y320 296 aa5.05□□□□□ -1.6
CD44-217ENST00000525348 BTN3A1O00481 513 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 TBX3O15119 743 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 PHGDHO43175 533 aaKnown RBP5.04□□□□□ -1.6
CD44-217ENST00000525348 ORC4O43929 436 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 CSF1RP07333 972 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 EBLN1P0CF75 366 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 DRD4P21917 467 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 PPIFP30405 207 aaKnown RBP5.04□□□□□ -1.6
CD44-217ENST00000525348 LLGL1Q15334 1064 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 AMOTQ4VCS5 1084 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 ICE2Q659A1 982 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 RGS7BPQ6MZT1 257 aaPredicted RBP5.04□□□□□ -1.6
CD44-217ENST00000525348 LAYNQ6UX15 382 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 MAEAQ7L5Y9 396 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 DTX2Q86UW9 622 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 SLC15A4Q8N697 577 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 TSR2Q969E8 191 aaKnown RBP5.04□□□□□ -1.6
CD44-217ENST00000525348 VOPP1Q96AW1 172 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 HAPLN3Q96S86 360 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 NELL2Q99435 816 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 CXorf36Q9H7Y0 433 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 SERTAD4Q9NUC0 356 aa5.04□□□□□ -1.6
CD44-217ENST00000525348 WIPF3A6NGB9 483 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 MYO1FO00160 1098 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 ERC2O15083 957 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 PROP1O75360 226 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 TTLL1O95922 423 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 C1RP00736 705 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 THP07101 528 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 EN2P19622 333 aaPredicted RBP5.03□□□□□ -1.6
CD44-217ENST00000525348 GPSM2P81274 684 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 MYO1EQ12965 1108 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 CNN3Q15417 329 aaKnown RBP5.03□□□□□ -1.6
CD44-217ENST00000525348 MINDY4Q4G0A6 757 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 APOA5Q6Q788 366 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 ZNF788Q6ZQV5 615 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 ZNF551Q7Z340 670 aaPredicted RBP5.03□□□□□ -1.6
CD44-217ENST00000525348 ATRIPQ8WXE1 791 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 ANKS1AQ92625 1134 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 ARHGEF3Q9NR81 526 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 STK32BQ9NY57 414 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 SERGEFQ9UGK8 458 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 L1RE1Q9UN81 338 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 TBC1D30Q9Y2I9 924 aa5.03□□□□□ -1.6
CD44-217ENST00000525348 AOX1Q06278 1338 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 CAPN8A6NHC0 703 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 FAM227AF5H4B4 570 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 ZNF213O14771 459 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 SLC16A3O15427 465 aaKnown RBP5.02□□□□□ -1.61
CD44-217ENST00000525348 IL6RP08887 468 aaPredicted RBP5.02□□□□□ -1.61
CD44-217ENST00000525348 GPD1P21695 349 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 CD38P28907 300 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 SLC7A1P30825 629 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 CCT8P50990 548 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 WNT3P56703 355 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 MRPS21P82921 87 aaKnown RBP5.02□□□□□ -1.61
CD44-217ENST00000525348 GALEQ14376 348 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 GRM3Q14832 879 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 TREML2Q5T2D2 321 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 ZNF618Q5T7W0 954 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 SFRP4Q6FHJ7 346 aaPredicted RBP5.02□□□□□ -1.61
CD44-217ENST00000525348 ZNF783Q6ZMS7 281 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 ANKRD13AQ8IZ07 590 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 OR6B3Q8NGW1 331 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 NELL1Q92832 810 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 GLG1Q92896 1179 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 C1orf112Q9NSG2 853 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 DLL3Q9NYJ7 618 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 SHOC2Q9UQ13 582 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 FRMD4BQ9Y2L6 1034 aa5.02□□□□□ -1.61
CD44-217ENST00000525348 H0YIZ8 118 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 GCOM1H8Y6P7 765 aaPredicted RBP5.01□□□□□ -1.61
CD44-217ENST00000525348 FESP07332 822 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 U2AF1L5P0DN76 240 aaPredicted RBP5.01□□□□□ -1.61
CD44-217ENST00000525348 KCNA3P22001 575 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 ADORA2AP29274 412 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 ATXN1P54253 815 aaKnown RBP5.01□□□□□ -1.61
CD44-217ENST00000525348 U2AF1Q01081 240 aaKnown RBP eCLIP5.01□□□□□ -1.61
CD44-217ENST00000525348 SLC13A2Q13183 592 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 ARHGAP29Q52LW3 1261 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 DCAF12L1Q5VU92 463 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 LMBRD2Q68DH5 695 aaPredicted RBP5.01□□□□□ -1.61
CD44-217ENST00000525348 ZDHHC24Q6UX98 284 aa5.01□□□□□ -1.61
CD44-217ENST00000525348 GAS2L3Q86XJ1 694 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms