RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SLC20A1Q8WUM9 679 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 CPLX3Q8WVH0 158 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 SHC3Q92529 594 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 TSC1Q92574 1164 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 TAF4BQ92750 862 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 MRPL38Q96DV4 380 aaKnown RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 SAMD11Q96NU1 681 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 SYT15Q9BQS2 421 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 ZNF518BQ9C0D4 1074 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 IGFLR1Q9H665 355 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 PLCB1Q9NQ66 1216 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 ENTPD7Q9NQZ7 604 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 FAM49BQ9NUQ9 324 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 APEX2Q9UBZ4 518 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 TJP2Q9UDY2 1190 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 CYTH4Q9UIA0 394 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 TSR3Q9UJK0 312 aaKnown RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 CNTN6Q9UQ52 1028 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 STXBP5LQ9Y2K9 1186 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 PCDHB4Q9Y5E5 795 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 CDY1Q9Y6F8 540 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 DOCK6Q96HP0 2047 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 COL6A3P12111 3177 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 A0A1W2PQC6 194 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 MTMR11A4FU01 709 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 A8MXQ7 604 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 F8VZ95 297 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 TGM5O43548 720 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 RFPL2O75678 378 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 GFPT2O94808 682 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 CLSTN1O94985 981 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 ADCY5O95622 1261 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 URODP06132 367 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 ODC1P11926 461 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 SKILP12757 684 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 PTPN1P18031 435 aaKnown RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 CYP2F1P24903 491 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 CA8P35219 290 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 GNL1P36915 607 aaPredicted RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 PGFP49763 221 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 CLCN4P51793 760 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 MYO1EQ12965 1108 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 RAPGEF1Q13905 1077 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 RAB33AQ14088 237 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 CCDC85BQ15834 202 aaPredicted RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 DUSP6Q16828 381 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 SLC39A12Q504Y0 691 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 INTS6LQ5JSJ4 861 aaKnown RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 FKBP15Q5T1M5 1219 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 SLC8B1Q6J4K2 584 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 DENND1BQ6P3S1 775 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 PDXDC1Q6P996 788 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 TMEM270Q6UE05 265 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 GPRIN1Q7Z2K8 1008 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 SLC47A2Q86VL8 602 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 TTC30AQ86WT1 665 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 FAM71AQ8IYT1 594 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 FUKQ8N0W3 1084 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 MICALL1Q8N3F8 863 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 RBBP8NLQ8NC74 664 aaPredicted RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 MICAL1Q8TDZ2 1067 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 DDX1Q92499 740 aaKnown RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 MYLPFQ96A32 169 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 PRR14Q9BWN1 585 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 APOL5Q9BWW9 433 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 TRIM5Q9C035 493 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 GRPEL1Q9HAV7 217 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 CYP3A43Q9HB55 503 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 MRPL17Q9NRX2 175 aaKnown RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 BARX2Q9UMQ3 279 aaPredicted RBP6.91□□□□□ -1.3
CD44-214ENST00000525211 RWDD3Q9Y3V2 267 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 BACE2Q9Y5Z0 518 aa6.91□□□□□ -1.3
CD44-214ENST00000525211 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 SPTBN5Q9NRC6 3674 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 LRRC53A6NM62 1247 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 HHLA1C9JL84 531 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 TRAPPC3O43617 180 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 TBX10O75333 385 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ABLIM3O94929 683 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 PLEKP08567 350 aaPredicted RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 KRT5P13647 590 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ATF6P18850 670 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 BDNFP23560 247 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 KLRC2P26717 231 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ADORA2BP29275 332 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 CASP14P31944 242 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 LTBRP36941 435 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ADKP55263 362 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 NTHL1P78549 312 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 GCNT1Q02742 428 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 UBE3AQ05086 875 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ADCY1Q08828 1119 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ELAVL2Q12926 359 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 DUSP4Q13115 394 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 MTMR3Q13615 1198 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 SMC1AQ14683 1233 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 DDR2Q16832 855 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms