RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 AIFM2Q9BRQ8 373 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 LDAHQ9H6V9 325 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 KIAA1586Q9HCI6 787 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 KCTD5Q9NXV2 234 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 TMA7Q9Y2S6 64 aaKnown RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 RRP7AQ9Y3A4 280 aaKnown RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 PCDHGA2Q9Y5H1 932 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 C4AP0C0L4 1744 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 C4BP0C0L5 1744 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 QSER1Q2KHR3 1735 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 ARHGEF17Q96PE2 2063 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-208ENST00000524652 CACNA1FO60840 1977 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 KCPQ6ZWJ8 1503 aa3.8□□□□□ -1.8
CSDE1-208ENST00000524652 BCL9O00512 1426 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 CEMIPQ8WUJ3 1361 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 PCDH11XQ9BZA7 1347 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 PCDH11YQ9BZA8 1340 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 APAF1O14727 1248 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 PROP1O75360 226 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 PRKD3O94806 890 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 IGLV2-14P01704 120 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 AMY1AP04745 511 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 VIL1P09327 827 aaKnown RBP3.79□□□□□ -1.8
CSDE1-208ENST00000524652 DDCP20711 480 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 ERVK-21P61565 698 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 ATP8B2P98198 1209 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 WDR43Q15061 677 aaKnown RBP eCLIP3.79□□□□□ -1.8
CSDE1-208ENST00000524652 RNF219Q5W0B1 726 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-208ENST00000524652 KRT27Q7Z3Y8 459 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 KRT26Q7Z3Y9 468 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 NLGN4YQ8NFZ3 816 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-208ENST00000524652 WDR66Q8TBY9 1149 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 RAPGEF4Q8WZA2 1011 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 THUMPD2Q9BTF0 503 aaKnown RBP3.79□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF277Q9NRM2 450 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-208ENST00000524652 SLC17A6Q9P2U8 582 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 NUDCQ9Y266 331 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 FRMD4BQ9Y2L6 1034 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 GPR45Q9Y5Y3 372 aa3.79□□□□□ -1.8
CSDE1-208ENST00000524652 MAP3K5Q99683 1374 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF521Q96K83 1311 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 CDHR4A6H8M9 788 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 EXOC5O00471 708 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 RNMTO43148 476 aaKnown RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 C1QL1O75973 258 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 HAUS5O94927 633 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 ZFPL1O95159 310 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 AGXTP21549 392 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 TMPOP42166 694 aaKnown RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 NOMO3P69849 1222 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 CREMQ03060 361 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 SLFN5Q08AF3 891 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 PLEKHO1Q53GL0 409 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 NOMO2Q5JPE7 1267 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 KIAA0895LQ68EN5 471 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 SP5Q6BEB4 398 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 SDE2Q6IQ49 451 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 ZNF530Q6P9A1 599 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 MCM10Q7L590 875 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 IL17REQ8NFR9 667 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 OR2I1PQ8NGU4 316 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 SSH3Q8TE77 659 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 RUNDC1Q96C34 613 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 MARS2Q96GW9 593 aaKnown RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 C7orf25Q9BPX7 421 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 C11orf54Q9H0W9 315 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 TMX1Q9H3N1 280 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 HSFX1Q9UBD0 423 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 RUVBL1Q9Y265 456 aaKnown RBP3.78□□□□□ -1.8
CSDE1-208ENST00000524652 NUP98P52948 1817 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 BCORQ6W2J9 1755 aa3.78□□□□□ -1.8
CSDE1-208ENST00000524652 ANKRD36CQ5JPF3 1778 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 N4BP2Q86UW6 1770 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-208ENST00000524652 ARFGEF2Q9Y6D5 1785 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 TRGV11A0A075B6L2 103 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 A0A1W2PS29 197 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 TRIM75PA6NK02 468 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 KCNQ3O43525 872 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 PEX1O43933 1283 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 RBMXL2O75526 392 aaKnown RBP3.77□□□□□ -1.81
CSDE1-208ENST00000524652 MATN4O95460 622 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 WASP42768 502 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 ATXN1P54253 815 aaKnown RBP3.77□□□□□ -1.81
CSDE1-208ENST00000524652 RIPK4P57078 832 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 CTXN1P60606 82 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 GEN1Q17RS7 908 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 AMOTQ4VCS5 1084 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 LHFPL2Q6ZUX7 228 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 AMOTL1Q8IY63 956 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 ZGPATQ8N5A5 531 aaKnown RBP3.77□□□□□ -1.81
CSDE1-208ENST00000524652 DNAJC5GQ8N7S2 189 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 Q8NA96 180 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 GSTO2Q9H4Y5 243 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 DNM3Q9UQ16 869 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 NEU2Q9Y3R4 380 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 COL24A1Q17RW2 1714 aa3.77□□□□□ -1.81
CSDE1-208ENST00000524652 AFDNP55196 1824 aaKnown RBP3.77□□□□□ -1.81
CSDE1-208ENST00000524652 MAPK8IP3Q9UPT6 1336 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 TCRBV7S2A1N4TA0A589 114 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 CCDC151A5D8V7 595 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms