RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 PHF20Q9BVI0 1012 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 EPB41L4AQ9HCS5 686 aaPredicted RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 ZNF229Q9UJW7 825 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 TTC37Q6PGP7 1564 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 RRN3P2A6NIE6 340 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 WDR47O94967 919 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 HPGDP15428 266 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 SH2D3CQ8N5H7 860 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 MIR1-1HGQ9H1L0 117 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 PRMT7Q9NVM4 692 aaPredicted RBP10.92□□□□□ -0.66
CTSC-203ENST00000524463 IPPQ9Y573 584 aa10.92□□□□□ -0.66
CTSC-203ENST00000524463 SYNMO15061 1565 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 F8W810 466 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 CLASP2O75122 1294 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 ARP10275 920 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 GYS1P13807 737 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 PGM1P36871 562 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 OXCT1P55809 520 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 ZNF200P98182 395 aaPredicted RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 STK4Q13043 487 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 TPGS1Q6ZTW0 290 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 RBM23Q86U06 439 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 ZSWIM2Q8NEG5 633 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 TFB1MQ8WVM0 346 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 RNF208Q9H0X6 261 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 NDE1Q9NXR1 346 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 TRMT6Q9UJA5 497 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 LOC100653049A0A140TA62 436 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 RASSF9O75901 435 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 KRT34O76011 436 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 CSF1RP07333 972 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 KLRC1P26715 233 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 PTGER2P43116 358 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 NFIAQ12857 509 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 TRIM32Q13049 653 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 STX3Q13277 289 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 BTG3Q14201 252 aaPredicted RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 NOL9Q5SY16 702 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 B3GALNT2Q8NCR0 500 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 TRAPPC12Q8WVT3 735 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 CELF6Q96J87 481 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 TRIM9Q9C026 710 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.91□□□□□ -0.66
CTSC-203ENST00000524463 PLA2G4CQ9UP65 541 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 AK9Q5TCS8 1911 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 A0A087WZ62 844 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 CAND2O75155 1236 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 SGPL1O95470 568 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 UCHL3P15374 230 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 FGFR2P21802 821 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 RHOAP61586 193 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 BFSP2Q13515 415 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 EML3Q32P44 896 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 NLRP14Q86W24 1093 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 FDXACB1Q9BRP7 624 aaPredicted RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 EHD2Q9NZN4 543 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 NYAP2Q9P242 653 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 PLOD1Q02809 727 aaPredicted RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 BYSLQ13895 437 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 UBE2Q2Q8WVN8 375 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 OSBPL1AQ9BXW6 950 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 STK33Q9BYT3 514 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 NT5MQ9NPB1 228 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 DDX28Q9NUL7 540 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 NUDT5Q9UKK9 219 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 LINC00854A0A1B0GVQ3 168 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 PDK1Q15118 436 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 HHIPL2Q6UWX4 724 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 ARRDC4Q8NCT1 418 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 UCMAQ8WVF2 138 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 RHBGQ9H310 441 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 ZCCHC17Q9NP64 241 aaKnown RBP10.91□□□□□ -0.66
CTSC-203ENST00000524463 PKD2L2Q9NZM6 624 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 TBX20Q9UMR3 447 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 TECPR2O15040 1411 aa10.91□□□□□ -0.66
CTSC-203ENST00000524463 GMNCA6NCL1 334 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 NTSR2O95665 410 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 RHOCP08134 193 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 PIGHQ14442 188 aaPredicted RBP10.9□□□□□ -0.66
CTSC-203ENST00000524463 HIC1Q14526 733 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 PRAMEF19Q5SWL8 479 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 USP49Q70CQ1 688 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 TRMT11Q7Z4G4 463 aaKnown RBP10.9□□□□□ -0.66
CTSC-203ENST00000524463 IARS2Q9NSE4 1012 aaKnown RBP10.9□□□□□ -0.66
CTSC-203ENST00000524463 RPS6KB2Q9UBS0 482 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 RUVBL2Q9Y230 463 aaKnown RBP10.9□□□□□ -0.66
CTSC-203ENST00000524463 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 TPST1O60507 370 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 PRIM2P49643 509 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 EFHC1Q5JVL4 640 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 ADCK1Q86TW2 530 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 DDX42Q86XP3 938 aaKnown RBP eCLIP10.9□□□□□ -0.66
CTSC-203ENST00000524463 CENPTQ96BT3 561 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 FICDQ9BVA6 458 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 GEMIN8Q9NWZ8 242 aaKnown RBP10.9□□□□□ -0.66
CTSC-203ENST00000524463 MAGI3Q5TCQ9 1506 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 C2orf81A6NN90 581 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 SLC16A3O15427 465 aaKnown RBP10.9□□□□□ -0.66
CTSC-203ENST00000524463 MSH4O15457 936 aa10.9□□□□□ -0.66
CTSC-203ENST00000524463 POLBP06746 335 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms