RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CYP27A1Q02318 531 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 MDH1BQ5I0G3 518 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 FGF13Q92913 245 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 SPATA17Q96L03 361 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 MYADMQ96S97 322 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 NT5C1AQ9BXI3 368 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 LRRC3Q9BY71 257 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 GPR88Q9GZN0 384 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 DPEP3Q9H4B8 488 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 EHD2Q9NZN4 543 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 UXTQ9UBK9 157 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-225ENST00000523950 ZMYM5Q9UJ78 669 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 GTPBP10A4D1E9 387 aaKnown RBP13.36□□□□□ -0.27
VEGFA-225ENST00000523950 DCXO43602 365 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 CILPO75339 1184 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 SOAT2O75908 522 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 NOL4O94818 638 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 SP100P23497 879 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-225ENST00000523950 EEF1GP26641 437 aaKnown RBP13.36□□□□□ -0.27
VEGFA-225ENST00000523950 ANXA13P27216 316 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 CDC25CP30307 473 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 MTIF2P46199 727 aaKnown RBP13.36□□□□□ -0.27
VEGFA-225ENST00000523950 CUL2Q13617 745 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 TAF12Q16514 161 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 MAN2A1Q16706 1144 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 PTPN21Q16825 1174 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 CAVIN1Q6NZI2 390 aaKnown RBP13.36□□□□□ -0.27
VEGFA-225ENST00000523950 MTSS1LQ765P7 747 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 IRF2BP1Q8IU81 584 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 NPAS3Q8IXF0 933 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 TRMT2BQ96GJ1 504 aaKnown RBP13.36□□□□□ -0.27
VEGFA-225ENST00000523950 C8orf48Q96LL4 319 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 FAM81BQ96LP2 452 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 CISHQ9NSE2 258 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 SORCS3Q9UPU3 1222 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 GREB1Q4ZG55 1949 aa13.36□□□□□ -0.27
VEGFA-225ENST00000523950 DENND4CQ5VZ89 1909 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 SOBPA7XYQ1 873 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 PI4K2BG5E9Z4 385 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 LRRN2O75325 713 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 MYL4P12829 197 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 BDNFP23560 247 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 GRIK1P39086 918 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-225ENST00000523950 ACOT1Q86TX2 421 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 FAM35AQ86V20 835 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 SCN4BQ8IWT1 228 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 UBALD2Q8IYN6 164 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 EHBP1Q8NDI1 1231 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 JAKMIP2Q96AA8 810 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 ELMO3Q96BJ8 720 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 SMARCD1Q96GM5 515 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 MYRFLQ96LU7 910 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 B3GNT5Q9BYG0 378 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 NAT10Q9H0A0 1025 aaKnown RBP13.35□□□□□ -0.27
VEGFA-225ENST00000523950 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■■□□□ 14
VEGFA-225ENST00000523950 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
VEGFA-225ENST00000523950 OBSL1O75147 1896 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 NUP210Q8TEM1 1887 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-225ENST00000523950 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 ANHXE9PGG2 379 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 HMGA1P17096 107 aaKnown RBP13.34□□□□□ -0.27
VEGFA-225ENST00000523950 CEBPBP17676 345 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 CD58P19256 250 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 DDX6P26196 483 aaKnown RBP eCLIP13.34□□□□□ -0.272e-7■■□□□ 12.2
VEGFA-225ENST00000523950 GABRR2P28476 465 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 CCR2P41597 374 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 MYL5Q02045 173 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 GCNT1Q02742 428 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 TYRO3Q06418 890 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 DDR2Q16832 855 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 ARHGAP15Q53QZ3 475 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 GBP6Q6ZN66 633 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 SHKBP1Q8TBC3 707 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 WHAMMQ8TF30 809 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 GIPC2Q8TF65 315 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 TATDN2Q93075 761 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 ZNF518BQ9C0D4 1074 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 DMAP1Q9NPF5 467 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-225ENST00000523950 GCNT4Q9P109 453 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 LIMD1Q9UGP4 676 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 HMGXB4Q9UGU5 601 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 MUTYHQ9UIF7 546 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 PATJQ8NI35 1801 aa13.34□□□□□ -0.27
VEGFA-225ENST00000523950 MYH10P35580 1976 aa13.33□□□□□ -0.28
VEGFA-225ENST00000523950 KCNJ18B7U540 433 aa13.33□□□□□ -0.28
VEGFA-225ENST00000523950 MOSPD3O75425 235 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms