RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 GTF3C4Q9UKN8 822 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 SNX9Q9Y5X1 595 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 PATJQ8NI35 1801 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 PVALEFA0A1B0GWK0 134 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 TGFB1I1O43294 461 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 RETP07949 1114 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 TMEM191BP0C7N4 346 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 PFKLP17858 780 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 MAPRE1Q15691 268 aaKnown RBP13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 DDR2Q16832 855 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 TMEM196Q5HYL7 178 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 TXNDC8Q6A555 127 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 SHC4Q6S5L8 630 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 VSTM1Q6UX27 236 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 OSTM1Q86WC4 334 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 CBWD2Q8IUF1 395 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 WDR49Q8IV35 697 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 MAB21L3Q8N8X9 362 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 GLIS3Q8NEA6 775 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 OR5B17Q8NGF7 314 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 TMEM174Q8WUU8 243 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 KBTBD7Q8WVZ9 684 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 HPDLQ96IR7 371 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 HINFPQ9BQA5 517 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 HPS4Q9NQG7 708 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 CDH9Q9ULB4 789 aa13.56□□□□□ -0.24
TOP1MT-217ENST00000523417 ANK1P16157 1881 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 CHURC1-FNTBB4DL54 471 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 HRO43593 1189 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 ATG13O75143 517 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 TACC1O75410 805 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 TNNC2P02585 160 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 KRT19P08727 400 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 WARSP23381 471 aaKnown RBP13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 GPR15P49685 360 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 LMNB2Q03252 620 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 TNK2Q07912 1038 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 BFSP1Q12934 665 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 PON2Q15165 354 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 PDGFRLQ15198 375 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 C4orf50Q6ZRC1 276 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 UNC13DQ70J99 1090 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 DGLUCYQ7Z3D6 616 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 ADGRF2Q8IZF7 708 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 RBM12Q9NTZ6 932 aaKnown RBP13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 GCNT4Q9P109 453 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 CCL26Q9Y258 94 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 R3HCC1Q9Y3T6 440 aaKnown RBP13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 CEP250Q9BV73 2442 aa13.55□□□□□ -0.24
TOP1MT-217ENST00000523417 OTOL1A6NHN0 477 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 TADA3O75528 432 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 CST3P01034 146 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 USP17L7P0C7H9 530 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 ACAT1P24752 427 aaKnown RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 LMO2P25791 158 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 PPP3CCP48454 512 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 PSMD6Q15008 389 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 SNRNP35Q16560 246 aaKnown RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 BMT2Q1RMZ1 405 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 RSPO4Q2I0M5 234 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 FAM26FQ5R3K3 315 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 TRAPPC11Q7Z392 1133 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 WDR5BQ86VZ2 330 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 SPATA2LQ8IUW3 424 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 SMG9Q9H0W8 520 aaKnown RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 AGPAT3Q9NRZ7 376 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 MAGEC2Q9UBF1 373 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 GMEB2Q9UKD1 530 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 RAB23Q9ULC3 237 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 UBE4BO95155 1302 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 PTPRJQ12913 1337 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 DCHS1Q96JQ0 3298 aa13.54□□□□□ -0.24
TOP1MT-217ENST00000523417 TSC2P49815 1807 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 DRD1P21728 446 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 FNTBP49356 437 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 CDR1P51861 262 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 ASIC1P78348 528 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 GRSF1Q12849 480 aaKnown RBP eCLIP13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 FBXO43Q4G163 708 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 SDHAF4Q5VUM1 108 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 FSTL4Q6MZW2 842 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 CC2D1AQ6P1N0 951 aaPredicted RBP13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 Q6ZS52 159 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 CAMKK1Q8N5S9 505 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 XXYLT1Q8NBI6 393 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 TTC8Q8TAM2 541 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 MYCBPAPQ8TBZ2 947 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 OSCP1Q8WVF1 389 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 SCFD1Q8WVM8 642 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 HPS3Q969F9 1004 aa13.53□□□□□ -0.24
TOP1MT-217ENST00000523417 EXOC4Q96A65 974 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms