RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 APBB3O95704 486 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 WNT7BP56706 349 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 GRIN1Q05586 938 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 USP4Q13107 963 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 DMC1Q14565 340 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 ELF2Q15723 593 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 DDR2Q16832 855 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 PSAPL1Q6NUJ1 521 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 CD101Q93033 1021 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 PKMYT1Q99640 499 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 EDEM2Q9BV94 578 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 ABCB6Q9NP58 842 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 DUS2Q9NX74 493 aaKnown RBP24.46■■□□□ 1.51
PVT1-218ENST00000523328 UXTQ9UBK9 157 aaPredicted RBP24.46■■□□□ 1.51
PVT1-218ENST00000523328 L1RE1Q9UN81 338 aa24.46■■□□□ 1.51
PVT1-218ENST00000523328 BCLAF3A2AJT9 711 aaKnown RBP24.45■■□□□ 1.5
PVT1-218ENST00000523328 RHOBTB1O94844 696 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 IL18RAPO95256 599 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 CYP2F1P24903 491 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 PNPLA4P41247 253 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 CREB5Q02930 508 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 EML3Q32P44 896 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 POMGNT1Q8WZA1 660 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 LARP4BQ92615 738 aaKnown RBP24.45■■□□□ 1.5
PVT1-218ENST00000523328 EXOC4Q96A65 974 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 ACDQ96AP0 544 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 CYP2S1Q96SQ9 504 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 ACBD6Q9BR61 282 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 TMEM206Q9H813 350 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 WNT6Q9Y6F9 365 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 PTPRDP23468 1912 aa24.45■■□□□ 1.5
PVT1-218ENST00000523328 FAM208BQ5VWN6 2430 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 PPP1R37O75864 691 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 CAVIN2O95810 425 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 NEFLP07196 543 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 RPL10AP62906 217 aaKnown RBP24.44■■□□□ 1.5
PVT1-218ENST00000523328 CCDC142Q17RM4 750 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 INTS6LQ5JSJ4 861 aaKnown RBP24.44■■□□□ 1.5
PVT1-218ENST00000523328 SCARA3Q6AZY7 606 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 ZNF720Q7Z2F6 126 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 ATP2A3Q93084 1043 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 TRPC7Q9HCX4 862 aa24.44■■□□□ 1.5
PVT1-218ENST00000523328 DDX43Q9NXZ2 648 aaKnown RBP24.44■■□□□ 1.5
PVT1-218ENST00000523328 C4orf47A7E2U8 309 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 PROS1P07225 676 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 USP17L7P0C7H9 530 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 ACAT1P24752 427 aaKnown RBP24.43■■□□□ 1.5
PVT1-218ENST00000523328 POLR2BP30876 1174 aaKnown RBP24.43■■□□□ 1.5
PVT1-218ENST00000523328 C1orf127Q8N9H9 656 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 ZSWIM2Q8NEG5 633 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 CXorf38Q8TB03 319 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 HVCN1Q96D96 273 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 STRA6Q9BX79 667 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 GCNT4Q9P109 453 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 RALYQ9UKM9 306 aaKnown RBP24.43■■□□□ 1.5
PVT1-218ENST00000523328 GTF3C4Q9UKN8 822 aa24.43■■□□□ 1.5
PVT1-218ENST00000523328 TRAV19A0A0A6YYK7 116 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 LNP1A1A4G5 178 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 H3BQV1 296 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 GIPC1O14908 333 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 ITGB3P05106 788 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 CKMP06732 381 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 GJB2P29033 226 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 LONP1P36776 959 aaKnown RBP24.42■■□□□ 1.5
PVT1-218ENST00000523328 IFNAR2P48551 515 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 NOVA1P51513 510 aaKnown RBP24.42■■□□□ 1.5
PVT1-218ENST00000523328 PSMD2Q13200 908 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 POSTNQ15063 836 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 OSTM1Q86WC4 334 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 SFR1Q86XK3 245 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 AGAP1Q9UPQ3 857 aa24.42■■□□□ 1.5
PVT1-218ENST00000523328 DDIT3P35638 169 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 DGKEP52429 567 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 TFAMQ00059 246 aaKnown RBP24.41■■□□□ 1.5
PVT1-218ENST00000523328 KCNA1Q09470 495 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 CFAP221Q4G0U5 840 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 PMS2CLQ68D20 193 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 BRSK2Q8IWQ3 736 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 TMEM86AQ8N2M4 240 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 ARL14EPQ8N8R7 260 aaPredicted RBP24.41■■□□□ 1.5
PVT1-218ENST00000523328 KRI1Q8N9T8 703 aaKnown RBP24.41■■□□□ 1.5
PVT1-218ENST00000523328 TTC16Q8NEE8 873 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 RASSF8Q8NHQ8 419 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 LINC00597Q9H2U6 94 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 INVSQ9Y283 1065 aa24.41■■□□□ 1.5
PVT1-218ENST00000523328 C2orf78A6NCI8 922 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 HCRTO43612 131 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 HUS1O60921 280 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 TCF3P15923 654 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 GBP1P32455 592 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 MYL7Q01449 175 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 TSTD1Q8NFU3 115 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 SH3RF2Q8TEC5 729 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 USP33Q8TEY7 942 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 FAM84AQ96KN4 292 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 FAM213AQ9BRX8 229 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 GDAP2Q9NXN4 497 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 WASF3Q9UPY6 502 aa24.4■■□□□ 1.5
PVT1-218ENST00000523328 ANTXRLA6NF34 631 aa24.39■■□□□ 1.49
PVT1-218ENST00000523328 C1QTNF9BB2RNN3 333 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms