RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SLC39A5Q6ZMH5 540 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 ESPNLQ6ZVH7 1005 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 CLEC14AQ86T13 490 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 SGMS1Q86VZ5 419 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 ZNF808Q8N4W9 903 aaPredicted RBP6.97□□□□□ -1.29
PABPC1-216ENST00000520868 ANKRD53Q8N9V6 530 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 FERMT2Q96AC1 680 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 TMEM176AQ96HP8 235 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 RIOK1Q9BRS2 568 aaKnown RBP6.97□□□□□ -1.29
PABPC1-216ENST00000520868 MOV10L1Q9BXT6 1211 aaKnown RBP6.97□□□□□ -1.29
PABPC1-216ENST00000520868 OSBPL6Q9BZF3 934 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 AGO3Q9H9G7 860 aaKnown RBP6.97□□□□□ -1.29
PABPC1-216ENST00000520868 TLR9Q9NR96 1032 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 MCM9Q9NXL9 1143 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 DNAI1Q9UI46 699 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 NOP58Q9Y2X3 529 aaKnown RBP6.97□□□□□ -1.29
PABPC1-216ENST00000520868 UNC80Q8N2C7 3258 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 DNAH12Q6ZR08 3092 aa6.97□□□□□ -1.29
PABPC1-216ENST00000520868 LAMA2P24043 3122 aaKnown RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 KBTBD13C9JR72 458 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 STRNO43815 780 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 FZD7O75084 574 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 FSBPO95073 299 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 JUNP05412 331 aaKnown RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 CYP2D6P10635 497 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 CYBAP13498 195 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 ACRV1P26436 265 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 ADCYAP1R1P41586 468 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 GDF5P43026 501 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 LSSP48449 732 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 IL2P60568 153 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 ACAP1Q15027 740 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 USP39Q53GS9 565 aaKnown RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 PLEKHG4Q58EX7 1191 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 KIAA1755Q5JYT7 1200 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 C9orf50Q5SZB4 431 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 KRT40Q6A162 431 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 FAM109BQ6ICB4 259 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 AACSQ86V21 672 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 CERS3Q8IU89 383 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 ITPRIPQ8IWB1 547 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 FTSJ3Q8IY81 847 aaKnown RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 ANKRD35Q8N283 1001 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 ZNF610Q8N9Z0 462 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 SDR42E1Q8WUS8 393 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 BADQ92934 168 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 RPL10LQ96L21 214 aaKnown RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 CDX2Q99626 313 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 CRNKL1Q9BZJ0 848 aaKnown RBP6.96□□□□□ -1.3
PABPC1-216ENST00000520868 SPATC1LQ9H0A9 340 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 IL1RAPL2Q9NP60 686 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 MSRAQ9UJ68 235 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 EXOC6BQ9Y2D4 811 aa6.96□□□□□ -1.3
PABPC1-216ENST00000520868 CAPN14A8MX76 684 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 CCER2I3L3R5 266 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 SEPT4O43236 478 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 TGM5O43548 720 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 FLOT1O75955 427 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 VSIG10L2P0DP72 767 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 STAT3P40763 770 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 GABPAQ06546 454 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 FOXE3Q13461 319 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 SEPT7Q16181 437 aaKnown RBP6.95□□□□□ -1.3
PABPC1-216ENST00000520868 TRIM60Q495X7 471 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 SLC9C2Q5TAH2 1124 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 SPICE1Q8N0Z3 855 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 SLC44A5Q8NCS7 719 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 DYNLL2Q96FJ2 89 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 ARMT1Q9H993 441 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 SLC5A4Q9NY91 659 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 RCAN3Q9UKA8 241 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 MAPRE3Q9UPY8 281 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 GIT1Q9Y2X7 761 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 ZNF532Q9HCE3 1301 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 VCANP13611 3396 aa6.95□□□□□ -1.3
PABPC1-216ENST00000520868 TRIM43BA6NCK2 446 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 GSG1L2A8MUP6 293 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 GOLIM4O00461 696 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 PRKAB2O43741 272 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 TOX4O94842 621 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 FKBP9O95302 570 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 AKR1B1P15121 316 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 TLE2Q04725 743 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 LRRC41Q15345 812 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 TTF1Q15361 905 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-216ENST00000520868 FAM47AQ5JRC9 791 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 CEP85Q6P2H3 762 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 UNQ6494/PRO21346Q6UXR6 183 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 FKBP9P1Q75LS8 142 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 ERC1Q8IUD2 1116 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 LCORLQ8N3X6 602 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 CDYL2Q8N8U2 506 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 TRIM43Q96BQ3 446 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-216ENST00000520868 GPHA2Q96T91 129 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 MROH8Q9H579 483 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 IL23AQ9NPF7 189 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 PCDHB6Q9Y5E3 794 aa6.94□□□□□ -1.3
PABPC1-216ENST00000520868 MYO5AQ9Y4I1 1855 aaKnown RBP6.94□□□□□ -1.3
PABPC1-216ENST00000520868 CYP2D7A0A087X1C5 515 aa6.93□□□□□ -1.3
PABPC1-216ENST00000520868 SMIM22K7EJ46 135 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms