RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CYP4F11Q9HBI6 524 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 MRPS18AQ9NVS2 196 aaKnown RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 STK32BQ9NY57 414 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 TESQ9UGI8 421 aaKnown RBP4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 SNX13Q9Y5W8 968 aa4.03□□□□□ -1.76
HMGB1P41-201ENST00000520234 CCDC194A0A1B0GVG4 234 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 TMEM191CA6NGB0 347 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 PYCARD-AS1I3L0S3 204 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 DCLK1O15075 740 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 PROM1O43490 865 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 IL18RAPO95256 599 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 ONECUT2O95948 504 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 ITGAMP11215 1152 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 CHRM3P20309 590 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 GATA3P23771 443 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 CD6P30203 668 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 PPIFP30405 207 aaKnown RBP4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 PXNP49023 591 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 NXPH1P58417 271 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 ITIH3Q06033 890 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 BOP1Q14137 746 aaKnown RBP4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 MGAT5BQ3V5L5 792 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 TMEM108Q6UXF1 575 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 DPP9Q86TI2 863 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 SESTD1Q86VW0 696 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 MICU3Q86XE3 530 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 MPP5Q8N3R9 675 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 SDR16C5Q8N3Y7 309 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 IPCEF1Q8WWN9 437 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 ASB10Q8WXI3 467 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 APOL5Q9BWW9 433 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 TTYH3Q9C0H2 523 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 MS4A7Q9GZW8 240 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 SMOC2Q9H3U7 446 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 PNPLA8Q9NP80 782 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 CASS4Q9NQ75 786 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 SERHLQ9NQF3 203 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 XPNPEP3Q9NQH7 507 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 KCTD5Q9NXV2 234 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 COL20A1Q9P218 1284 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 SCRIBQ14160 1630 aa4.02□□□□□ -1.77
HMGB1P41-201ENST00000520234 CECR2Q9BXF3 1484 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 INMTO95050 263 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 PIK3CBP42338 1070 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 CASP5P51878 434 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZNF134P52741 427 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 AK2P54819 239 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 RPS16P62249 146 aaKnown RBP4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 DAG1Q14118 895 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 INSCQ1MX18 579 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 PLA1AQ53H76 456 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 C3orf38Q5JPI3 329 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 RBM20Q5T481 1227 aaKnown RBP4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 DCAF12L1Q5VU92 463 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 ICE2Q659A1 982 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 VWA1Q6PCB0 445 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 FAM109AQ8N4B1 249 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 B3GALNT2Q8NCR0 500 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 OR56A3Q8NH54 315 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 SSH3Q8TE77 659 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 LINC00476Q8WZB0 136 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 LARP4BQ92615 738 aaKnown RBP4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 SPSB4Q96A44 273 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 PGBD1Q96JS3 809 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 PPP1R9BQ96SB3 815 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 AGAP2Q99490 1192 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 AIFM2Q9BRQ8 373 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 COLEC11Q9BWP8 271 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 BRIP1Q9BX63 1249 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 NAA15Q9BXJ9 866 aaKnown RBP4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 AMBRA1Q9C0C7 1298 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 DHX36Q9H2U1 1008 aaKnown RBP4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 PADI4Q9UM07 663 aa4.01□□□□□ -1.77
HMGB1P41-201ENST00000520234 COL4A3Q01955 1670 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 MAST3O60307 1309 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 LOC102723971A0A1B0GUV8 181 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 CCP110O43303 1012 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 PEX1O43933 1283 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 ESRRBO95718 433 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 TM4SF4P48230 202 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 DGKEP52429 567 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 LILRA4P59901 499 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
HMGB1P41-201ENST00000520234 KRT17Q04695 432 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 ZNF543Q08ER8 600 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 UBE4AQ14139 1066 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 E2F2Q14209 437 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 SF3B3Q15393 1217 aaKnown RBP4□□□□□ -1.77
HMGB1P41-201ENST00000520234 NBPF8Q3BBV2 869 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 TEDDM1Q5T9Z0 273 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 MRGPRGQ86SM5 289 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 YAF2Q8IY57 180 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 SUPT20HQ8NEM7 779 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 SLC30A5Q8TAD4 765 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 SLC9A6Q92581 669 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 FAM136AQ96C01 138 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 TNIP3Q96KP6 325 aa4□□□□□ -1.77
HMGB1P41-201ENST00000520234 SNX22Q96L94 193 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms