RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 ZCCHC17Q9NP64 241 aaKnown RBP7.94□□□□□ -1.14
CLK4-202ENST00000519132 HOXC10Q9NYD6 342 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 GIMAP2Q9UG22 337 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 OIP5O43482 229 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 TMCC2O75069 709 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 AKR1B1P15121 316 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 RFX8Q6ZV50 586 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 KRT77Q7Z794 578 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 SNX32Q86XE0 403 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 TRIML1Q8N9V2 468 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 FLAD1Q8NFF5 587 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 GATA6Q92908 595 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 VMP1Q96GC9 406 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 PDCD2LQ9BRP1 358 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 AGXT2Q9BYV1 514 aa7.94□□□□□ -1.14
CLK4-202ENST00000519132 NSFL1CQ9UNZ2 370 aaKnown RBP7.94□□□□□ -1.14
CLK4-202ENST00000519132 RIC1Q4ADV7 1423 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 LCE2BO14633 110 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 FPR1P21462 350 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 FGL2Q14314 439 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 CCDC178Q5BJE1 867 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 SLC22A25Q6T423 547 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 UNC13DQ70J99 1090 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 AMIGO3Q86WK7 504 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 RUBCNQ92622 972 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 EZH1Q92800 747 aaPredicted RBP7.93□□□□□ -1.14
CLK4-202ENST00000519132 EPS8L2Q9H6S3 715 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 TRMT1Q9NXH9 659 aaKnown RBP7.93□□□□□ -1.14
CLK4-202ENST00000519132 LRP5O75197 1615 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 P4HA2O15460 535 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 COBLO75128 1261 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 CSF1RP07333 972 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 RFC4P35249 363 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 HOXD12P35452 270 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 EPHA10Q5JZY3 1008 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 TTC38Q5R3I4 469 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 SLC9C2Q5TAH2 1124 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 NFXL1Q6ZNB6 911 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 RRAGAQ7L523 313 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 ZMAT2Q96NC0 199 aaKnown RBP7.93□□□□□ -1.14
CLK4-202ENST00000519132 YIPF2Q9BWQ6 316 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 MRPL18Q9H0U6 180 aaKnown RBP7.93□□□□□ -1.14
CLK4-202ENST00000519132 DEF6Q9H4E7 631 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 COMMD8Q9NX08 183 aa7.93□□□□□ -1.14
CLK4-202ENST00000519132 NIP7Q9Y221 180 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLK4-202ENST00000519132 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
CLK4-202ENST00000519132 NTSR2O95665 410 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 GPTP24298 496 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 TDGQ13569 410 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 SYNE3Q6ZMZ3 975 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 SPACA3Q8IXA5 215 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 STK11IPQ8N1F8 1099 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 LSMEM1Q8N8F7 131 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 CENPIQ92674 756 aaPredicted RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 UTP14AQ9BVJ6 771 aaKnown RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 CWC15Q9P013 229 aaKnown RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 RUVBL1Q9Y265 456 aaKnown RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 SH3TC1Q8TE82 1336 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 RTL9Q8NET4 1388 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 CDKL5O76039 1030 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 XPAP23025 273 aaPredicted RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 IL4RP24394 825 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 HOXD10P28358 340 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 NPTX2P47972 431 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 RFX5P48382 616 aaPredicted RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 ATP2B3Q16720 1220 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 SUSD4Q5VX71 490 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 TSHZ3Q63HK5 1081 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 ABHD15Q6UXT9 468 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 NDUFAF2Q8N183 169 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 ARL10Q8N8L6 244 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 CENPTQ96BT3 561 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 HHIPL1Q96JK4 782 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 C7orf25Q9BPX7 421 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 PYM1Q9BRP8 204 aaKnown RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 BRIP1Q9BX63 1249 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 KCND1Q9NSA2 647 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 TRMT112Q9UI30 125 aaKnown RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 DNTTP04053 509 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 CD96P40200 585 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 EGR3Q06889 387 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 PRPF4BQ13523 1007 aaKnown RBP7.92□□□□□ -1.14
CLK4-202ENST00000519132 GAB4Q2WGN9 574 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 MUM1L1Q5H9M0 696 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 AP1ARQ63HQ0 302 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 MCTP2Q6DN12 878 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 KIAA1841Q6NSI8 718 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 KLHDC10Q6PID8 442 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 CREG2Q8IUH2 290 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 NUP133Q8WUM0 1156 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 AFG1LQ8WV93 481 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 GIMAP1Q8WWP7 306 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 BRI3BPQ8WY22 251 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 GOLGA1Q92805 767 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 FAM89AQ96GI7 184 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 KATNAL1Q9BW62 490 aa7.92□□□□□ -1.14
CLK4-202ENST00000519132 AMNQ9BXJ7 453 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms