RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SLC13A2Q13183 592 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 CTBP1Q13363 440 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 GRM3Q14832 879 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 GFOD2Q3B7J2 385 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 SFRP4Q6FHJ7 346 aaPredicted RBP4.64□□□□□ -1.67
SKP1-205ENST00000519054 RGS7BPQ6MZT1 257 aaPredicted RBP4.64□□□□□ -1.67
SKP1-205ENST00000519054 APOA5Q6Q788 366 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 CCDC149Q6ZUS6 474 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 GRASPQ7Z6J2 395 aaPredicted RBP4.64□□□□□ -1.67
SKP1-205ENST00000519054 PRIMA1Q86XR5 153 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 ZNF280BQ86YH2 543 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 FMNL3Q8IVF7 1028 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 FAM98AQ8NCA5 519 aaKnown RBP4.64□□□□□ -1.67
SKP1-205ENST00000519054 NELL2Q99435 816 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 CPNE5Q9HCH3 593 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 SEMA4GQ9NTN9 838 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 GOLGA6AQ9NYA3 693 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 EHD3Q9NZN3 535 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 L1RE1Q9UN81 338 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 SHOC2Q9UQ13 582 aa4.64□□□□□ -1.67
SKP1-205ENST00000519054 MRPS17Q9Y2R5 130 aaKnown RBP4.64□□□□□ -1.67
SKP1-205ENST00000519054 A0A087WWL8 130 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 TBC1D4O60343 1298 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 TTLL1O95922 423 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 IGLV2-14P01704 120 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 EBLN1P0CF75 366 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 ATF3P18847 181 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 EN2P19622 333 aaPredicted RBP4.63□□□□□ -1.67
SKP1-205ENST00000519054 PPIFP30405 207 aaKnown RBP4.63□□□□□ -1.67
SKP1-205ENST00000519054 CLCN2P51788 898 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 ELLP55199 621 aaPredicted RBP4.63□□□□□ -1.67
SKP1-205ENST00000519054 SATB1Q01826 763 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 KRT17Q04695 432 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 PPP4R4Q6NUP7 873 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 MAVSQ7Z434 540 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 FAM156AQ8NDB6 213 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 TTC8Q8TAM2 541 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 ATRIPQ8WXE1 791 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 RAPGEF4Q8WZA2 1011 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 ANKS1AQ92625 1134 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 UROC1Q96N76 676 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 HAPLN3Q96S86 360 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 DPH1Q9BZG8 443 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 MS4A7Q9GZW8 240 aaPredicted RBP4.63□□□□□ -1.67
SKP1-205ENST00000519054 SMURF2Q9HAU4 748 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 METTL14Q9HCE5 456 aaKnown RBP4.63□□□□□ -1.67
SKP1-205ENST00000519054 PTGFRNQ9P2B2 879 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 CPNE7Q9UBL6 633 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 NDRG4Q9ULP0 352 aaKnown RBP4.63□□□□□ -1.67
SKP1-205ENST00000519054 TPCN1Q9ULQ1 816 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 SSX2IPQ9Y2D8 614 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 ENTPD2Q9Y5L3 495 aa4.63□□□□□ -1.67
SKP1-205ENST00000519054 FRMPD2Q68DX3 1309 aaPredicted RBP4.63□□□□□ -1.67
SKP1-205ENST00000519054 LRRC3CA6NJW4 275 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 MYO1FO00160 1098 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 C1QL1O75973 258 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 ERBB2P04626 1255 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 CYP2C9P11712 490 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 XRCC6P12956 609 aaKnown RBP eCLIP4.62□□□□□ -1.67
SKP1-205ENST00000519054 BRAFP15056 766 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 SUMO3P55854 103 aaPredicted RBP4.62□□□□□ -1.67
SKP1-205ENST00000519054 WNT3P56703 355 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 RAB32Q13637 225 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 BMPR2Q13873 1038 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 E2F2Q14209 437 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 KIAA0753Q2KHM9 967 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 ZIK1Q3SY52 487 aaPredicted RBP4.62□□□□□ -1.67
SKP1-205ENST00000519054 PLAC9Q5JTB6 97 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 TEDDM1Q5T9Z0 273 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 DPY19L2P1Q6NXN4 242 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 AMIGO2Q86SJ2 522 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 DTX2Q86UW9 622 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 RASAL3Q86YV0 1011 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 ZNF384Q8TF68 577 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 ATG4AQ8WYN0 398 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 MAML1Q92585 1016 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 MESP1Q9BRJ9 268 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 CXorf36Q9H7Y0 433 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 SACM1LQ9NTJ5 587 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 OBP2AQ9NY56 170 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 TBC1D30Q9Y2I9 924 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 COX11Q9Y6N1 276 aa4.62□□□□□ -1.67
SKP1-205ENST00000519054 TPP1O14773 563 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 SLC16A3O15427 465 aaKnown RBP4.61□□□□□ -1.67
SKP1-205ENST00000519054 TLR5O60602 858 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 NXPH3O95157 252 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 PCSK6P29122 969 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 LRPAP1P30533 357 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 LIPAP38571 399 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 CCT8P50990 548 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 CACNB3P54284 484 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 MYO1EQ12965 1108 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 GBX1Q14549 363 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 MGAT5BQ3V5L5 792 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 FAM153CQ494X1 144 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 SLC44A4Q53GD3 710 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 PLA1AQ53H76 456 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 TREML2Q5T2D2 321 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 ZNF618Q5T7W0 954 aa4.61□□□□□ -1.67
SKP1-205ENST00000519054 RNF220Q5VTB9 566 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms