RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SMOC2Q9H3U7 446 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 FAM83DQ9H4H8 585 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 NRDE2Q9H7Z3 1164 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 ARFGAP3Q9NP61 516 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 ZNF212Q9UDV6 495 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 ITGB1BP2Q9UKP3 347 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 CAPN11Q9UMQ6 739 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 DMTF1Q9Y222 760 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 MYRFQ9Y2G1 1151 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.43□□□□□ -1.54
SQLE-202ENST00000518604 CENPVL1A0A0U1RR11 272 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 BTF3P20290 206 aaKnown RBP5.42□□□□□ -1.54
SQLE-202ENST00000518604 CHRM3P20309 590 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 FGFR2P21802 821 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 ACVR2AP27037 513 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 SERPINB3P29508 390 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 CD6P30203 668 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 DGKEP52429 567 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 LILRA4P59901 499 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 TAP1Q03518 808 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 KRT17Q04695 432 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 ARHGEF7Q14155 803 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 E2F2Q14209 437 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 ARL13BQ3SXY8 428 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 ICE2Q659A1 982 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 HIBCHQ6NVY1 386 aaPredicted RBP5.42□□□□□ -1.54
SQLE-202ENST00000518604 KRT28Q7Z3Y7 464 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 SPRED1Q7Z699 444 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 MRGPREQ86SM8 312 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 LNX2Q8N448 690 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 RAPGEF4Q8WZA2 1011 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 CERS4Q9HA82 394 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 PLCB1Q9NQ66 1216 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 HDAC9Q9UKV0 1011 aa5.42□□□□□ -1.54
SQLE-202ENST00000518604 ABHD14A-ACY1A0A1B0GW23 586 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 PIPSLA2A3N6 862 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 AQP7P3A6NL99 342 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 PRRG2O14669 202 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 HNRNPDLO14979 420 aaKnown RBP5.41□□□□□ -1.54
SQLE-202ENST00000518604 NCK2O43639 380 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 EGR2P11161 476 aaPredicted RBP5.41□□□□□ -1.54
SQLE-202ENST00000518604 MAKP20794 623 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 GATA3P23771 443 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 PTPAQ15257 358 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 NPY5RQ15761 445 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 RBM20Q5T481 1227 aaKnown RBP5.41□□□□□ -1.54
SQLE-202ENST00000518604 KCNV1Q6PIU1 500 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 USP17L6PQ6QN14 398 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 ZDHHC24Q6UX98 284 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 LIX1LQ8IVB5 337 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 VGLL2Q8N8G2 317 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 FANCBQ8NB91 859 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 PROKR1Q8TCW9 393 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 PTCD3Q96EY7 689 aaKnown RBP5.41□□□□□ -1.54
SQLE-202ENST00000518604 AMBRA1Q9C0C7 1298 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 FNIP2Q9P278 1114 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 MID2Q9UJV3 735 aa5.41□□□□□ -1.54
SQLE-202ENST00000518604 PROM1O43490 865 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 LDHAP00338 332 aaKnown RBP5.4□□□□□ -1.54
SQLE-202ENST00000518604 A1BGP04217 495 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 MYL4P12829 197 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 CPT1AP50416 773 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 NXPH1P58417 271 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 DGCR2P98153 550 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 ITIH3Q06033 890 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 SCAPQ12770 1279 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 MYO1EQ12965 1108 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 TP53BP2Q13625 1128 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 KLHDC7AQ5VTJ3 777 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 FNDC7Q5VTL7 733 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 XRRA1Q6P2D8 792 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 GPR149Q86SP6 731 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 BPIFB1Q8TDL5 484 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 FAM136AQ96C01 138 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 SERHL2Q9H4I8 314 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 SLC2A4RGQ9NR83 387 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 TRMT13Q9NUP7 481 aaKnown RBP5.4□□□□□ -1.54
SQLE-202ENST00000518604 DKK4Q9UBT3 224 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 TAGLN3Q9UI15 199 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 NDRG4Q9ULP0 352 aaKnown RBP5.4□□□□□ -1.54
SQLE-202ENST00000518604 LRCH1Q9Y2L9 728 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 REXO2Q9Y3B8 237 aaKnown RBP5.4□□□□□ -1.54
SQLE-202ENST00000518604 DAAM1Q9Y4D1 1078 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 CEP83Q9Y592 693 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 CDY1Q9Y6F8 540 aa5.4□□□□□ -1.54
SQLE-202ENST00000518604 NCANO14594 1321 aa5.4□□□□□ -1.55
SQLE-202ENST00000518604 UNC119BA6NIH7 251 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 LPXNO60711 386 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 IDEP14735 1019 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 TPH1P17752 444 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 KCNA3P22001 575 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 FSTL1Q12841 308 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 PMS2P11Q13670 270 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 PLAG1Q6DJT9 500 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 FCRL6Q6DN72 434 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 MZT2AQ6P582 158 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 DTX2Q86UW9 622 aa5.39□□□□□ -1.55
SQLE-202ENST00000518604 KRT73Q86Y46 540 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms