RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 SNHG28P0DPA3 235 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 PIM1P11309 404 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 ATP5F1P24539 256 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 CLCN2P51788 898 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 SP2Q02086 613 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 KIF23Q02241 960 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 PCID2Q5JVF3 399 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 TREML2Q5T2D2 321 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 MEX3CQ5U5Q3 659 aaKnown RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 FAM160B1Q5W0V3 765 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 PGM2L1Q6PCE3 622 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 MTHFD1LQ6UB35 978 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 TMEM108Q6UXF1 575 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 MEPCEQ7L2J0 689 aaKnown RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 PARS2Q7L3T8 475 aaKnown RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 IRF2BP2Q7Z5L9 587 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 MRPL10Q7Z7H8 261 aaKnown RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 PIP4P1Q86T03 277 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 USP37Q86T82 979 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 GALNT4Q8N4A0 578 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 NRACQ8N912 160 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 PNLDC1Q8NA58 520 aaKnown RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 C16orf52Q8NHV5 167 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 ZNF398Q8TD17 642 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 SNX18Q96RF0 628 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 MRPL46Q9H2W6 279 aaKnown RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 TMX1Q9H3N1 280 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 WDCPQ9H6R7 721 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 MKS1Q9NXB0 559 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 HESX1Q9UBX0 185 aa2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 SCAF8Q9UPN6 1271 aaKnown RBP2.87□□□□□ -1.95
SNORA40.15-201ENST00000516884 FAM90A10PA6NDY2 464 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 LRRC14BA6NHZ5 514 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 MYMKA6NI61 221 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 FCHO1O14526 889 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 VPS4BO75351 444 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 USP1O94782 785 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 NPSP0C0P6 89 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 ATXN1LP0C7T5 689 aaKnown RBP2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 CYP2A6P11509 494 aaPredicted RBP2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 ENGP17813 658 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 PLCD1P51178 756 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 LOXL3P58215 753 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 EMC10Q5UCC4 262 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 FCRL6Q6DN72 434 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 NAPRTQ6XQN6 538 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 ZNF813Q6ZN06 617 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 Q6ZWC4 215 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 C3orf20Q8ND61 904 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 ATG4AQ8WYN0 398 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 SLC5A4Q9NY91 659 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 POLHQ9Y253 713 aa2.86□□□□□ -1.95
SNORA40.15-201ENST00000516884 IGKV2D-30A0A075B6S6 120 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 CCDC187A0A096LP49 1063 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 TCRBV5S1A1TA0A578 114 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 SLC16A6O15403 523 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 MT-CO1P00395 513 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 FESP07332 822 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 THBS4P35443 961 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 THBS3P49746 956 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 HK3P52790 923 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 NOGQ13253 232 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 ACAP2Q15057 778 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 C10orf25Q5T742 122 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 SYDE2Q5VT97 1194 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 SDE2Q6IQ49 451 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 DLK2Q6UY11 383 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 NANOGP1Q8N7R0 232 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 ATL2Q8NHH9 583 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 SOCS4Q8WXH5 440 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 DAZAP1Q96EP5 407 aaKnown RBP2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 SLC46A1Q96NT5 459 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 PTDSS2Q9BVG9 487 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 TRNAU1APQ9NX07 287 aaKnown RBP2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 SERTAD3Q9UJW9 196 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 PRKAB1Q9Y478 270 aa2.85□□□□□ -1.95
SNORA40.15-201ENST00000516884 A1L4Q6 167 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 M0QYG6 137 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 GABRDO14764 452 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 OAZ2O95190 189 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 ZRANB2O95218 330 aaKnown RBP eCLIP2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 TOMM40O96008 361 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 SMARCA1P28370 1054 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 NANOS2P60321 138 aaKnown RBP2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 LRRC41Q15345 812 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 LEXMQ3ZCV2 418 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 LONRF3Q496Y0 759 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 MIS18BP1Q6P0N0 1132 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 DEF8Q6ZN54 512 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 C9orf47Q6ZRZ4 202 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 PPP1R3BQ86XI6 285 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 CNGA4Q8IV77 575 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 PRR18Q8N4B5 295 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 TERB1Q8NA31 727 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 FAM46DQ8NEK8 389 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 PRSS3P2Q8NHM4 247 aa2.84□□□□□ -1.95
SNORA40.15-201ENST00000516884 ADAMTS15Q8TE58 950 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms