RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	C4orf50	Q6ZRC1	276 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	HS2ST1	Q7LGA3	356 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	OSTM1	Q86WC4	334 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	KIAA2013	Q8IYS2	634 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	ZNF507	Q8TCN5	953 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	KBTBD7	Q8WVZ9	684 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	SECISBP2L	Q93073	1101 aa	Known RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	HPDL	Q96IR7	371 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	MYRFL	Q96LU7	910 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	CGRRF1	Q99675	332 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	SMG9	Q9H0W8	520 aa	Known RBP	13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	WDR87	Q6ZQQ6	2873 aa		13.22	□□□□□ -0.29
CDK18-223	ENST00000515514	CYP2F1	P24903	491 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	CXCL12	P48061	93 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	SATB1	Q01826	763 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	TNK2	Q07912	1038 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	USP4	Q13107	963 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	CCIN	Q13939	588 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	PSMD6	Q15008	389 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	DDR2	Q16832	855 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	CCDC142	Q17RM4	750 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	BMT2	Q1RMZ1	405 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	WDR44	Q5JSH3	913 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	SCARA3	Q6AZY7	606 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	FAM171B	Q6P995	826 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514		Q6ZS52	159 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	MON1A	Q86VX9	555 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	GPIHBP1	Q8IV16	184 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	C12orf56	Q8IXR9	622 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	SYNPO	Q8N3V7	929 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	GPR161	Q8N6U8	529 aa	Known RBP	13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	MAB21L3	Q8N8X9	362 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	STKLD1	Q8NE28	680 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	SCFD1	Q8WVM8	642 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	USP13	Q92995	863 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	CEP295NL	Q96MC4	621 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	FNBP1	Q96RU3	617 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	FAM83C	Q9BQN1	747 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	SYT15	Q9BQS2	421 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	TDP1	Q9NUW8	608 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	FAM13B	Q9NYF5	915 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	CGN	Q9P2M7	1197 aa	Known RBP	13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	GTF3C4	Q9UKN8	822 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	CDH9	Q9ULB4	789 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	CCL26	Q9Y258	94 aa		13.21	□□□□□ -0.29
CDK18-223	ENST00000515514	DENND4C	Q5VZ89	1909 aa		13.21	□□□□□ -0.3
CDK18-223	ENST00000515514	PVALEF	A0A1B0GWK0	134 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	POLR2D	O15514	142 aa	Known RBP	13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	TGFB1I1	O43294	461 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	HCRT	O43612	131 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	DLAT	P10515	647 aa	Known RBP	13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	WARS	P23381	471 aa	Known RBP	13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	ME1	P48163	572 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	CYP2J2	P51589	502 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	CYP24A1	Q07973	514 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	PON2	Q15165	354 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	SDHAF4	Q5VUM1	108 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	RESP18	Q5W5W9	173 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	TXNDC8	Q6A555	127 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	VSTM1	Q6UX27	236 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	TRAPPC11	Q7Z392	1133 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	NELFCD	Q8IXH7	590 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	DCLK2	Q8N568	766 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	XXYLT1	Q8NBI6	393 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	MYLPF	Q96A32	169 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	RMDN1	Q96DB5	314 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	RBM12	Q9NTZ6	932 aa	Known RBP	13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	GMEB2	Q9UKD1	530 aa		13.2	□□□□□ -0.3
CDK18-223	ENST00000515514	STAU1	O95793	577 aa	Known RBP	13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	HOXA6	P31267	233 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	PSMC1	P62191	440 aa	Known RBP	13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	FAM160A1	Q05DH4	1040 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	RUNX3	Q13761	415 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	MTF1	Q14872	753 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	PDGFRL	Q15198	375 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	FSIP1	Q8NA03	581 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	TTC8	Q8TAM2	541 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	RIN3	Q8TB24	985 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	SPATA17	Q96L03	361 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	CRTAC1	Q9NQ79	661 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	HPS4	Q9NQG7	708 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	GKN1	Q9NS71	199 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	CFAP45	Q9UL16	551 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	RAB23	Q9ULC3	237 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	PCDHA7	Q9UN72	937 aa		13.19	□□□□□ -0.3
CDK18-223	ENST00000515514	PTPRD	P23468	1912 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	TRAV19	A0A0A6YYK7	116 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514		K7ESF4	209 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	TACC1	O75410	805 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	CKM	P06732	381 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	USP17L7	P0C7H9	530 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	TCF3	P15923	654 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	PFKL	P17858	780 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	TNNI1	P19237	187 aa		13.18	□□□□□ -0.3
CDK18-223	ENST00000515514	CNR2	P34972	360 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms