RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 NR1H3Q13133 447 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 ZNF77Q15935 545 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 MGAT5BQ3V5L5 792 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 EOGTQ5NDL2 527 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 DHRS13Q6UX07 377 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 USP37Q86T82 979 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 MON1AQ86VX9 555 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 WBP1Q96G27 269 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 EIF2AK1Q9BQI3 630 aaKnown RBP12.86□□□□□ -0.35
SMAD5-210ENST00000515005 KIFC3Q9BVG8 833 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 ZDHHC5Q9C0B5 715 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
SMAD5-210ENST00000515005 FAM124BQ9H5Z6 455 aaPredicted RBP12.86□□□□□ -0.35
SMAD5-210ENST00000515005 CALCOCO1Q9P1Z2 691 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 HSFX1Q9UBD0 423 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 BTBD3Q9Y2F9 522 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 FNDC3AQ9Y2H6 1198 aaKnown RBP12.86□□□□□ -0.35
SMAD5-210ENST00000515005 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
SMAD5-210ENST00000515005 NID2Q14112 1375 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 CILPO75339 1184 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 GABRG2P18507 467 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 IL12RB1P42701 662 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 TUFMP49411 452 aaKnown RBP12.85□□□□□ -0.35
SMAD5-210ENST00000515005 MYBPC2Q14324 1141 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 DEPTORQ8TB45 409 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 BAP1Q92560 729 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 HSD17B14Q9BPX1 270 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 CDT1Q9H211 546 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 GAREM1Q9H706 876 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 TM7SF3Q9NS93 570 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 TUBGCP4Q9UGJ1 667 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 SUSD2Q9UGT4 822 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 MYLKQ15746 1914 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 ANK1P16157 1881 aa12.85□□□□□ -0.35
SMAD5-210ENST00000515005 FLNCQ14315 2725 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 IGHDP01880 384 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 ZNF883P0CG24 379 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 GNSP15586 552 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 KIR2DL1P43626 348 aaPredicted RBP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 SLC6A11P48066 632 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 FAM160A1Q05DH4 1040 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 USP4Q13107 963 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 PTPRNQ16849 979 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 HSF5Q4G112 596 aaPredicted RBP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 OVOS1Q6IE37 1185 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 BLIDQ8IZY5 108 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 SNIP1Q8TAD8 396 aaKnown RBP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 ZNF419Q96HQ0 510 aaPredicted RBP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 CYP2S1Q96SQ9 504 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 TRIM4Q9C037 500 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 IL17BQ9UHF5 180 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMAD5-210ENST00000515005 DOPEY1Q5JWR5 2465 aa12.84□□□□□ -0.35
SMAD5-210ENST00000515005 FLRT2O43155 660 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 ATP2B1P20020 1258 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 CLDN6P56747 220 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 BNC1Q01954 994 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 RHDQ02161 417 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 DMP1Q13316 513 aaPredicted RBP12.83□□□□□ -0.36
SMAD5-210ENST00000515005 NPY5RQ15761 445 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 NTRK3Q16288 839 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 PREPLQ4J6C6 727 aaPredicted RBP12.83□□□□□ -0.36
SMAD5-210ENST00000515005 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 APBB1IPQ7Z5R6 666 aaPredicted RBP12.83□□□□□ -0.36
SMAD5-210ENST00000515005 TMPRSS12Q86WS5 348 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 SPACA3Q8IXA5 215 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 MCPH1Q8NEM0 835 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 OR10T2Q8NGX3 314 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
SMAD5-210ENST00000515005 YTHDC1Q96MU7 727 aaKnown RBP12.83□□□□□ -0.36
SMAD5-210ENST00000515005 RNF26Q9BY78 433 aaPredicted RBP12.83□□□□□ -0.36
SMAD5-210ENST00000515005 CYP8B1Q9UNU6 501 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 TNFSF13BQ9Y275 285 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 ABCA12Q86UK0 2595 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 LRRK2Q5S007 2527 aa12.83□□□□□ -0.36
SMAD5-210ENST00000515005 ANAPC1Q9H1A4 1944 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 TNFSF14O43557 240 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 NFATC1O95644 943 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 NAMPTP43490 491 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 AARSP49588 968 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMAD5-210ENST00000515005 KCNH2Q12809 1159 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 HLA-BQ31612 363 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 SLC39A12Q504Y0 691 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 ZC2HC1CQ53FD0 456 aaPredicted RBP12.82□□□□□ -0.36
SMAD5-210ENST00000515005 SYCP2LQ5T4T6 812 aa12.82□□□□□ -0.36
SMAD5-210ENST00000515005 C6orf118Q5T5N4 469 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms