RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 TCF4P15884 667 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 IGBP1P78318 339 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CDC42EP1Q00587 391 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 INCA1Q0VD86 236 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 MKRN3Q13064 507 aaKnown RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 RASA2Q15283 850 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 ARHGEF18Q6ZSZ5 1173 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 MOB2Q70IA6 237 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CENPUQ71F23 418 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 ZNF410Q86VK4 478 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CXorf38Q8TB03 319 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 HPDLQ96IR7 371 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 ACAP3Q96P50 834 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 PRMT1Q99873 361 aaKnown RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 NCAPGQ9BPX3 1015 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 FAM118BQ9BPY3 351 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 SDCBP2Q9H190 292 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 BARX2Q9UMQ3 279 aaPredicted RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 DERAQ9Y315 318 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 EVPLQ92817 2033 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 PLXNA1Q9UIW2 1896 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 TMEM120BA0PK00 339 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 H0YHG0 523 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 SGK1O00141 431 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 MICAL2O94851 1124 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 VIMP08670 466 aaKnown RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 KDELR1P24390 212 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 PCK1P35558 622 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 RAP1GAPP47736 663 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 GCLCP48506 637 aaPredicted RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 SNX16P57768 344 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 MYO1EQ12965 1108 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CCDC142Q17RM4 750 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 RNASEH2BQ5TBB1 312 aaKnown RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 MTHFD1LQ6UB35 978 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 PPP1R21Q6ZMI0 780 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 TMEM192Q8IY95 271 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CMASQ8NFW8 434 aaPredicted RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 FBXO41Q8TF61 875 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 SLC10A4Q96EP9 437 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CPXM1Q96SM3 734 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 PLCD4Q9BRC7 762 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 FHDC1Q9C0D6 1143 aaPredicted RBP15.62■□□□□ 0.09
NUP54-217ENST00000514987 ELOVL4Q9GZR5 314 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 SMYD3Q9H7B4 428 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 EFCC1Q9HA90 598 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 SPON1Q9HCB6 807 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 SAYSD1Q9NPB0 183 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 NKIRAS1Q9NYS0 192 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 SENP1Q9P0U3 644 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CYTH4Q9UIA0 394 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 NAALADL1Q9UQQ1 740 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 CAPN7Q9Y6W3 813 aa15.62■□□□□ 0.09
NUP54-217ENST00000514987 MGAMO43451 1857 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 ALOX15BO15296 676 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 BRAFP15056 766 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 ARF4P18085 180 aaPredicted RBP15.61■□□□□ 0.09
NUP54-217ENST00000514987 EPHX2P34913 555 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 CDH8P55286 799 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 SLC10A6Q3KNW5 377 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 DCAF4L1Q3SXM0 396 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 CDR2LQ86X02 465 aaPredicted RBP15.61■□□□□ 0.09
NUP54-217ENST00000514987 LRRC34Q8IZ02 419 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 CNPY4Q8N129 248 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 JOSD2Q8TAC2 188 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 ZNF668Q96K58 619 aaPredicted RBP15.61■□□□□ 0.09
NUP54-217ENST00000514987 HEXIM2Q96MH2 286 aaKnown RBP15.61■□□□□ 0.09
NUP54-217ENST00000514987 CNPY3Q9BT09 278 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 RSAD1Q9HA92 442 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 PLEKHA5Q9HAU0 1116 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 KCNK9Q9NPC2 374 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 METTL5Q9NRN9 209 aaKnown RBP15.61■□□□□ 0.09
NUP54-217ENST00000514987 DNAJC17Q9NVM6 304 aaKnown RBP15.61■□□□□ 0.09
NUP54-217ENST00000514987 FETUBQ9UGM5 382 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 AGAP1Q9UPQ3 857 aa15.61■□□□□ 0.09
NUP54-217ENST00000514987 A0A1B0GUA9 196 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 M0QYV0 167 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 CST8O60676 142 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 ERBB2P04626 1255 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 CETPP11597 493 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 TSHRP16473 764 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 DESP17661 470 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 ADORA2AP29274 412 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 GRM5P41594 1212 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 GPD2P43304 727 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 SLC18A1P54219 525 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 PCBP1Q15365 356 aaKnown RBP eCLIP15.6■□□□□ 0.09
NUP54-217ENST00000514987 CCDC38Q502W7 563 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 C9orf131Q5VYM1 1079 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 TXNRD3NBQ6F5E7 133 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 LCLAT1Q6UWP7 414 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 VSTM1Q6UX27 236 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 ILDR2Q71H61 639 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 PPIL6Q8IXY8 311 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 CCDC13Q8IYE1 715 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 KCTD6Q8NC69 237 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 AFG1LQ8WV93 481 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 CKAP2Q8WWK9 683 aa15.6■□□□□ 0.09
NUP54-217ENST00000514987 NLRP7Q8WX94 980 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms