RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	ZNF200	P98182	395 aa	Predicted RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	GCNT1	Q02742	428 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	MCL1	Q07820	350 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	UGCG	Q16739	394 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	MSS51	Q4VC12	460 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	SEZ6	Q53EL9	994 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	TFDP3	Q5H9I0	405 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	RNASEH2B	Q5TBB1	312 aa	Known RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	CYP4A22	Q5TCH4	519 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	RIPOR1	Q6ZS17	1223 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ARHGAP22	Q7Z5H3	698 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	PCGF5	Q86SE9	256 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ST13P4	Q8IZP2	240 aa	Predicted RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	IL31RA	Q8NI17	732 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ZNF398	Q8TD17	642 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	STRA6	Q9BX79	667 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	TMOD2	Q9NZR1	351 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	SHOC2	Q9UQ13	582 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ASB3	Q9Y575	518 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	UMODL1	Q5DID0	1318 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	MEI4	A8MW99	385 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	TRIM49D1	C9J1S8	452 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	TOM1L1	O75674	476 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	RNF8	O76064	485 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ANPEP	P15144	967 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	PSMA2	P25787	234 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ELK3	P41970	407 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	NRL	P54845	237 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	AQP5	P55064	265 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	CHI3L2	Q15782	390 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	CTC1	Q2NKJ3	1217 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	KBTBD12	Q3ZCT8	623 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	EFHC2	Q5JST6	749 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	MON1B	Q7L1V2	547 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ZNF677	Q86XU0	584 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	TMPRSS6	Q8IU80	811 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	RELL1	Q8IUW5	271 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	NUDCD3	Q8IVD9	361 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	C12orf56	Q8IXR9	622 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ABRA	Q8N0Z2	381 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	RBM15B	Q8NDT2	890 aa	Known RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	TMEM161B	Q8NDZ6	487 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.62	□□□□□ -1.35	2e-6	■■□□□ 11.4
NREP-222	ENST00000514515	HSPH1	Q92598	858 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	EZH1	Q92800	747 aa	Predicted RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	FAM136A	Q96C01	138 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	TRAPPC9	Q96Q05	1148 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	EPAS1	Q99814	870 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	ZNF395	Q9H8N7	513 aa	Predicted RBP	6.62	□□□□□ -1.35
NREP-222	ENST00000514515	KANSL3	Q9P2N6	904 aa		6.62	□□□□□ -1.35
NREP-222	ENST00000514515	DDX60L	Q5H9U9	1706 aa	Known RBP	6.61	□□□□□ -1.35
NREP-222	ENST00000514515	CLUH	O75153	1309 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	CREB3	O43889	395 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	ECE2	O60344	883 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	STAM2	O75886	525 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	FAM155B	O75949	473 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	MAPT	P10636	758 aa	Known RBP	6.61	□□□□□ -1.35
NREP-222	ENST00000514515	GDF10	P55107	478 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	NOMO3	P69849	1222 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	ASPH	Q12797	758 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	CUL2	Q13617	745 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	SMAD1	Q15797	465 aa	Known RBP	6.61	□□□□□ -1.35
NREP-222	ENST00000514515	DARS2	Q6PI48	645 aa	Known RBP	6.61	□□□□□ -1.35
NREP-222	ENST00000514515	MTHFD1L	Q6UB35	978 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	SCARA5	Q6ZMJ2	495 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	FAM43B	Q6ZT52	329 aa	Predicted RBP	6.61	□□□□□ -1.35
NREP-222	ENST00000514515	ILDR2	Q71H61	639 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	CRLF3	Q8IUI8	442 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	SP8	Q8IXZ3	490 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	KBTBD2	Q8IY47	623 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	KCTD6	Q8NC69	237 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	FBXO27	Q8NI29	283 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	TMC2	Q8TDI7	906 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	PYDC1	Q8WXC3	89 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	PTCD3	Q96EY7	689 aa	Known RBP	6.61	□□□□□ -1.35
NREP-222	ENST00000514515	TUBGCP5	Q96RT8	1024 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	PPCS	Q9HAB8	311 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	PCDH9	Q9HC56	1237 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	KRT82	Q9NSB4	513 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	SLC9A2	Q9UBY0	812 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	MAD1L1	Q9Y6D9	718 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	C10orf71	Q711Q0	1435 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	6.61	□□□□□ -1.35
NREP-222	ENST00000514515	TCRBV7S3A2	A0A539	114 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515		H7C0C1	242 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	NFIB	O00712	420 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	AVIL	O75366	819 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	PYGL	P06737	847 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	WEE2	P0C1S8	567 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	GTF2H1	P32780	548 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	ATP5O	P48047	213 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	SLC18A1	P54219	525 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	MED21	Q13503	144 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	BMPR2	Q13873	1038 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	GRAMD1B	Q3KR37	738 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	TKFC	Q3LXA3	575 aa		6.61	□□□□□ -1.35
NREP-222	ENST00000514515	WDR72	Q3MJ13	1102 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms