RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 GPRC5CQ9NQ84 441 aa10.42□□□□□ -0.74
PTPN20-228ENST00000513266 SLC38A7Q9NVC3 462 aa10.42□□□□□ -0.74
PTPN20-228ENST00000513266 BRPF3Q9ULD4 1205 aa10.42□□□□□ -0.74
PTPN20-228ENST00000513266 TIMM13Q9Y5L4 95 aaPredicted RBP10.42□□□□□ -0.74
PTPN20-228ENST00000513266 MYH10P35580 1976 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 DGAT1O75907 488 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 CER1O95813 267 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 F11P03951 625 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 JUPP14923 745 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 RPL9P32969 192 aaKnown RBP10.41□□□□□ -0.74
PTPN20-228ENST00000513266 MATKP42679 507 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 KIR2DL1P43626 348 aaPredicted RBP10.41□□□□□ -0.74
PTPN20-228ENST00000513266 NLRP12P59046 1061 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 USP4Q13107 963 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 TMEM132AQ24JP5 1023 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 HLA-BQ31612 363 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 DCAF4L1Q3SXM0 396 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 SYNE3Q6ZMZ3 975 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 TMEM130Q8N3G9 435 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 CEP120Q8N960 986 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 BICD2Q8TD16 824 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 CCDC12Q8WUD4 166 aaPredicted RBP10.41□□□□□ -0.74
PTPN20-228ENST00000513266 DYDC2Q96IM9 177 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 NRSN2Q9GZP1 204 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 CCDC113Q9H0I3 377 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 LINC00597Q9H2U6 94 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 CD93Q9NPY3 652 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 GMIPQ9P107 970 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 TCHHQ07283 1943 aa10.41□□□□□ -0.74
PTPN20-228ENST00000513266 A0A1B0GTW7 788 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 OR6C75A6NL08 312 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 M0QZQ0 153 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 ACKR2O00590 384 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 TRIM66O15016 1216 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 ZBTB43O43298 467 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 SLC37A4O43826 429 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 BRINP1O60477 761 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 DDX6P26196 483 aaKnown RBP eCLIP10.4□□□□□ -0.74
PTPN20-228ENST00000513266 MARCKSP29966 332 aaPredicted RBP10.4□□□□□ -0.74
PTPN20-228ENST00000513266 CDR1P51861 262 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 TMPRSS3P57727 454 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 FAM160A1Q05DH4 1040 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 NR1H3Q13133 447 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 VEPH1Q14D04 833 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 EPHA7Q15375 998 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 MON1AQ86VX9 555 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 TTC16Q8NEE8 873 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 GIPC2Q8TF65 315 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 SLC22A12Q96S37 553 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 OXCT2Q9BYC2 517 aaPredicted RBP10.4□□□□□ -0.74
PTPN20-228ENST00000513266 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
PTPN20-228ENST00000513266 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 HSFX1Q9UBD0 423 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 CYP8B1Q9UNU6 501 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 PAXBP1Q9Y5B6 917 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 RBM8AQ9Y5S9 174 aaKnown RBP10.4□□□□□ -0.74
PTPN20-228ENST00000513266 NUMA1Q14980 2115 aa10.4□□□□□ -0.74
PTPN20-228ENST00000513266 ARID1BQ8NFD5 2236 aaPredicted RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 GOLGA8AA7E2F4 631 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 GOLGA8BA8MQT2 603 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 KCNE1P15382 129 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 HMGA1P17096 107 aaKnown RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 CR2P20023 1033 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 HNF1BP35680 557 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 SLC6A11P48066 632 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 NFATC3Q12968 1075 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 TARDBPQ13148 414 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 UBAP2LQ14157 1087 aaKnown RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 TBC1D25Q3MII6 688 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 SYCP2LQ5T4T6 812 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 ZCCHC9Q8N567 271 aaKnown RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 SNRNP27Q8WVK2 155 aaKnown RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 DNASE2BQ8WZ79 361 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 YTHDC1Q96MU7 727 aaKnown RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 LGMNQ99538 433 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 SEPT5Q99719 369 aaPredicted RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 KCNMB3Q9NPA1 279 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 HSPBP1Q9NZL4 362 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 DDX25Q9UHL0 483 aaKnown RBP10.39□□□□□ -0.75
PTPN20-228ENST00000513266 SCN1AP35498 2009 aa10.39□□□□□ -0.75
PTPN20-228ENST00000513266 TADA3O75528 432 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 SLITRK3O94933 977 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 KAT7O95251 611 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 LIG1P18858 919 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 ACTN2P35609 894 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 ADD1P35611 737 aaKnown RBP10.38□□□□□ -0.75
PTPN20-228ENST00000513266 SERINC3Q13530 473 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 MYBPC2Q14324 1141 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 MGAT5BQ3V5L5 792 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 WDR45BQ5MNZ6 344 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 NT5DC1Q5TFE4 455 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 MOXD1Q6UVY6 613 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 USP49Q70CQ1 688 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 MAEAQ7L5Y9 396 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 TPH2Q8IWU9 490 aa10.38□□□□□ -0.75
PTPN20-228ENST00000513266 NAF1Q96HR8 494 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms