RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 GAD1Q99259 594 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 BAG1Q99933 345 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 IER2Q9BTL4 223 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 COLEC11Q9BWP8 271 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 INO80BQ9C086 356 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 CCDC113Q9H0I3 377 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 CACNG4Q9UBN1 327 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 SPEGQ15772 3267 aa11.27□□□□□ -0.61
PDLIM5-217ENST00000512274 TTC26A0AVF1 554 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CCDC169A6NNP5 214 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 NRG2O14511 850 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 EPN2O95208 641 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 LDHAP00338 332 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 C1RP00736 705 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CHRNB1P11230 501 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 ITGA4P13612 1032 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 ADSSP30520 456 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CASP14P31944 242 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 PXNP49023 591 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CLDN10P78369 228 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CAPSQ13938 189 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 TFDP1Q14186 410 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 RTP2Q5QGT7 225 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 DPY19L2P1Q6NXN4 242 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 Q6ZS52 159 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CEP57Q86XR8 500 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 SPEM1Q8N4L4 309 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNF397Q8NF99 534 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 SLC7A14Q8TBB6 771 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 EDEM2Q9BV94 578 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 HSPBP1Q9NZL4 362 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CEP72Q9P209 647 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 SUCLA2Q9P2R7 463 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 PYCARDQ9ULZ3 195 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 PIAS3Q9Y6X2 628 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 CNTNAP2Q9UHC6 1331 aa11.26□□□□□ -0.61
PDLIM5-217ENST00000512274 ASPMQ8IZT6 3477 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ARL5CA6NH57 179 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ADAM12O43184 909 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 EXOC3O60645 756 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 CEBPBP17676 345 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ANXA13P27216 316 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 GDI1P31150 447 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 KRT9P35527 623 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 MLH1P40692 756 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 CASP4P49662 377 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 PTENP60484 403 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 DSC1Q08554 894 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 KCNMA1Q12791 1236 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 STRN3Q13033 797 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 NOLC1Q14978 699 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 SLC5A9Q2M3M2 681 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 UBXN11Q5T124 520 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 SLC39A4Q6P5W5 647 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNF662Q6ZS27 426 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNF410Q86VK4 478 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 SMG8Q8ND04 991 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 DEPTORQ8TB45 409 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 HASPINQ8TF76 798 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ELSPBP1Q96BH3 223 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 PRIMPOLQ96LW4 560 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ZFP42Q96MM3 310 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNF830Q96NB3 372 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 CLSTN3Q9BQT9 956 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 TRMT61BQ9BVS5 477 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 FZD8Q9H461 694 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 ZNF334Q9HCZ1 680 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 AGPAT5Q9NUQ2 364 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 COQ4Q9Y3A0 265 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 HES2Q9Y543 173 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 SPAG17Q6Q759 2223 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 EML5Q05BV3 1969 aa11.25□□□□□ -0.61
PDLIM5-217ENST00000512274 CYSRT1A8MQ03 144 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 K7ERI5 159 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 KIF2AO00139 706 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 HNRNPDLO14979 420 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 CLIC2O15247 247 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 HYAL3O43820 417 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 EXTL3O43909 919 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 TADA2AO75478 443 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 RHOP08100 348 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 KRT13P13646 458 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 PROZP22891 400 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 MPLP40238 635 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 CREMQ03060 361 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 LAMTOR4Q0VGL1 99 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 PSMD5Q16401 504 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 EXOC3L4Q17RC7 722 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 CACNA2D4Q7Z3S7 1137 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 PDZD3Q86UT5 571 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 WDR5BQ86VZ2 330 aa11.24□□□□□ -0.61
PDLIM5-217ENST00000512274 ZBTB8OSQ8IWT0 167 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms