RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 VSTM1Q6UX27 236 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 UNC93AQ86WB7 457 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 TMC8Q8IU68 726 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 B3GALNT2Q8NCR0 500 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 TCEAL4Q96EI5 215 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 PCED1BQ96HM7 432 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 GCNAQ96QF7 691 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 LRRC3Q9BY71 257 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 SDCBP2Q9H190 292 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 DPEP3Q9H4B8 488 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 CYP3A43Q9HB55 503 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.285e-17■■■■■ 409.9
PTCD2-209ENST00000511752 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 ATP8B3O60423 1300 aa13.31□□□□□ -0.28
PTCD2-209ENST00000511752 A0A1W2PRU2 124 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 GJA1P17302 382 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 BDNFP23560 247 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 ANXA13P27216 316 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 CDC25CP30307 473 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 GRIK1P39086 918 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 CCR2P41597 374 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 FMO5P49326 533 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 GPR15P49685 360 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 NDST1P52848 882 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 NLRP12P59046 1061 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 CETN1Q12798 172 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 DDR2Q16832 855 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 TPD52L1Q16890 204 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-209ENST00000511752 CBWD6Q4V339 395 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 CBWD3Q5JTY5 395 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 CBWD5Q5RIA9 395 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 TRIM67Q6ZTA4 783 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 SLC44A3Q8N4M1 653 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 TTC39CQ8N584 583 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 RSAD2Q8WXG1 361 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 CEP295NLQ96MC4 621 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 ATXN3LQ9H3M9 355 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 SLITRK6Q9H5Y7 841 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 APOBEC3GQ9HC16 384 aaKnown RBP13.3□□□□□ -0.28
PTCD2-209ENST00000511752 ZNF334Q9HCZ1 680 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-209ENST00000511752 UXTQ9UBK9 157 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-209ENST00000511752 COQ4Q9Y3A0 265 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 NUMBLQ9Y6R0 609 aa13.3□□□□□ -0.28
PTCD2-209ENST00000511752 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 TRIM66O15016 1216 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 MOSPD3O75425 235 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 GABRR2P28476 465 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
PTCD2-209ENST00000511752 INCA1Q0VD86 236 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 TEAD2Q15562 447 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 SDHAF4Q5VUM1 108 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 PARM1Q6UWI2 310 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 ACOT1Q86TX2 421 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 FGF14Q92915 247 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 MED10Q9BTT4 135 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 MAGED2Q9UNF1 606 aaPredicted RBP13.29□□□□□ -0.28
PTCD2-209ENST00000511752 DUSP12Q9UNI6 340 aa13.29□□□□□ -0.28
PTCD2-209ENST00000511752 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCD2-209ENST00000511752 CUL9Q8IWT3 2517 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 M0R296 226 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 PMM2O15305 246 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 P4HA2O15460 535 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 LRRN2O75325 713 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 ECI2O75521 394 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
PTCD2-209ENST00000511752 CD58P19256 250 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 ERCC5P28715 1186 aaPredicted RBP13.28□□□□□ -0.28
PTCD2-209ENST00000511752 DPCR1Q3MIW9 517 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 CT47A1Q5JQC4 288 aaPredicted RBP13.28□□□□□ -0.28
PTCD2-209ENST00000511752 GAREM2Q75VX8 874 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 TRIM59Q8IWR1 403 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 CRYBG2Q8N1P7 616 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 TRMT2BQ96GJ1 504 aaKnown RBP13.28□□□□□ -0.28
PTCD2-209ENST00000511752 SPATA17Q96L03 361 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 KXD1Q9BQD3 176 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 NT5C1AQ9BXI3 368 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 B3GNT5Q9BYG0 378 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 FAM124BQ9H5Z6 455 aaPredicted RBP13.28□□□□□ -0.28
PTCD2-209ENST00000511752 ZFP14Q9HCL3 533 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 ZMYM5Q9UJ78 669 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 DENND4CQ5VZ89 1909 aa13.28□□□□□ -0.28
PTCD2-209ENST00000511752 BDP1A6H8Y1 2624 aa13.27□□□□□ -0.28
PTCD2-209ENST00000511752 GREB1Q4ZG55 1949 aa13.27□□□□□ -0.28
PTCD2-209ENST00000511752 VCANP13611 3396 aa13.27□□□□□ -0.28
PTCD2-209ENST00000511752 F8VP50 259 aa13.27□□□□□ -0.29
PTCD2-209ENST00000511752 CLDN5O00501 218 aa13.27□□□□□ -0.29
PTCD2-209ENST00000511752 CILPO75339 1184 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms