RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 FAM124BQ9H5Z6 455 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 EPS15L1Q9UBC2 864 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 LIMD1Q9UGP4 676 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 CDH7Q9ULB5 785 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 MRPS23Q9Y3D9 190 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 NME7Q9Y5B8 376 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 TSC2P49815 1807 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 A0A0C4DFX4 3053 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 ATP8B3O60423 1300 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 GOLGA6L3A6NEY3 463 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 TRIM66O15016 1216 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CILPO75339 1184 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CSH1P0DML2 217 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CSH2P0DML3 217 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 MYL4P12829 197 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 LAMP2P13473 410 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 ALADP13716 330 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 ATF6P18850 670 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CD58P19256 250 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 BDNFP23560 247 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 TBXAS1P24557 533 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 ANXA13P27216 316 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 GRIK1P39086 918 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 YWHAEP62258 255 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 TYRO3Q06418 890 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CUL2Q13617 745 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 MAN2A1Q16706 1144 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 DDR2Q16832 855 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CCDC142Q17RM4 750 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 SLC5A9Q2M3M2 681 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 ZSCAN23Q3MJ62 389 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 PRSS36Q5K4E3 855 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 TMC8Q8IU68 726 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 SCN4BQ8IWT1 228 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 EHBP1Q8NDI1 1231 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 GPR152Q8TDT2 470 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 GIPC2Q8TF65 315 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 ING5Q8WYH8 240 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 NXPE3Q969Y0 559 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 SPATA17Q96L03 361 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CEP295NLQ96MC4 621 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 NT5C1BQ96P26 610 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 LPIN3Q9BQK8 851 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 MED10Q9BTT4 135 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 LRRC3Q9BY71 257 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 B3GNT5Q9BYG0 378 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 ELOVL4Q9GZR5 314 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 CISHQ9NSE2 258 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 GDE1Q9NZC3 331 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 IGSF9Q9P2J2 1179 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 MUTYHQ9UIF7 546 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 NFE2L3Q9Y4A8 694 aa7.61□□□□□ -1.19
PDLIM5-215ENST00000511586 A0A1W2PRU2 124 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 SLC38A8A6NNN8 435 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 KCNJ18B7U540 433 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 ANHXE9PGG2 379 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 PI4K2BG5E9Z4 385 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 CLDN5O00501 218 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 DCXO43602 365 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 PRKCSHP14314 528 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 HMGA1P17096 107 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 GABRR2P28476 465 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 CDC25CP30307 473 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 CCR2P41597 374 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 GPR15P49685 360 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 MYL5Q02045 173 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 LRMPQ12912 555 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 ORC1Q13415 861 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 KCNJ12Q14500 433 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 PTPN21Q16825 1174 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 ZNF394Q53GI3 561 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 ARHGAP15Q53QZ3 475 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 HSP90AA4PQ58FG1 418 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 TCP11X2Q5H9J9 407 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 SDHAF4Q5VUM1 108 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 C11orf57Q6ZUT1 292 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 GAREM2Q75VX8 874 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 MTSS1LQ765P7 747 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 FAM35AQ86V20 835 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 NPAS3Q8IXF0 933 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 FUKQ8N0W3 1084 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 C12orf29Q8N999 325 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 LMO3Q8TAP4 145 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 SHKBP1Q8TBC3 707 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 WHAMMQ8TF30 809 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 KHSRPQ92945 711 aaKnown RBP eCLIP7.6□□□□□ -1.191e-6■■■■□ 21
PDLIM5-215ENST00000511586 TCEAL4Q96EI5 215 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 MCRS1Q96EZ8 462 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 CYFIP2Q96F07 1278 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 SMARCD1Q96GM5 515 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 TMEM176AQ96HP8 235 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 C8orf48Q96LL4 319 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 HEXIM2Q96MH2 286 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 GCNAQ96QF7 691 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 TWNKQ96RR1 684 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 ARID3AQ99856 593 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 TUBGCP2Q9BSJ2 902 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 ZNF518BQ9C0D4 1074 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 GPR88Q9GZN0 384 aa7.6□□□□□ -1.19
PDLIM5-215ENST00000511586 NAT10Q9H0A0 1025 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms