RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SMOQ99835 787 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 CPPED1Q9BRF8 314 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PLA2G12BQ9BX93 195 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 TLR10Q9BXR5 811 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 C12orf65Q9H3J6 166 aaKnown RBP6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 WASH6PQ9NQA3 447 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PRDM8Q9NQV8 689 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 HELLSQ9NRZ9 838 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 HS3ST4Q9Y661 456 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC30A1Q9Y6M5 507 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 H7C4K7 107 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 POLRMTO00411 1230 aaKnown RBP6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 FARP2O94887 1054 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 PYGLP06737 847 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 C1QTNF9P0C862 333 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 ADD2P35612 726 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 KCNA10Q16322 511 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 FAM110CQ1W6H9 321 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 TRIM60Q495X7 471 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 AGAP9Q5VTM2 703 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 SULT6B1Q6IMI4 303 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 MED25Q71SY5 747 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 TMTC1Q8IUR5 882 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 SYT12Q8IV01 421 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 RHOT2Q8IXI1 618 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 RNF169Q8NCN4 708 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 PNKPQ96T60 521 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 EIF2AK1Q9BQI3 630 aaKnown RBP6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 PYM1Q9BRP8 204 aaKnown RBP6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 FAM167BQ9BTA0 163 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 TWSG1Q9GZX9 223 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 PABPC3Q9H361 631 aaKnown RBP6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 KIF17Q9P2E2 1029 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC13A4Q9UKG4 626 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 CRYL1Q9Y2S2 319 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 SCINQ9Y6U3 715 aa6.34□□□□□ -1.39
HMGB1P47-201ENST00000511281 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 PCDH17O14917 1159 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 DHHO43323 396 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 MFAP3LO75121 409 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 COQ9O75208 318 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 RHOBTB3O94955 611 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 CKMT1AP12532 417 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 ATICP31939 592 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 DGKEP52429 567 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 CHN2P52757 468 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 GEMIN4P57678 1058 aaKnown RBP6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 TLE2Q04725 743 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 GRM7Q14831 915 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 TAF12Q16514 161 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 SLC4A8Q2Y0W8 1093 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZIK1Q3SY52 487 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 FAM102AQ5T9C2 384 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 MANEALQ5VSG8 457 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 SLFN13Q68D06 897 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 RETSATQ6NUM9 610 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 TAPT1Q6NXT6 567 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 ARHGEF18Q6ZSZ5 1173 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 SLC44A2Q8IWA5 706 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 OR1N1Q8NGS0 311 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZNF668Q96K58 619 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 MED15Q96RN5 788 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 TRIB1Q96RU8 372 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 TRIM5Q9C035 493 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZHX3Q9H4I2 956 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 RASSF1Q9NS23 344 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 PLA2G3Q9NZ20 509 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 VSX1Q9NZR4 365 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 CTTNBP2NLQ9P2B4 639 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 TBC1D30Q9Y2I9 924 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 NEU2Q9Y3R4 380 aa6.33□□□□□ -1.4
HMGB1P47-201ENST00000511281 SPATA31A3Q5VYP0 1347 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 CCDC195A0A1B0GUA6 201 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 PECAM1P16284 738 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 RXRGP48443 463 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 SATB1Q01826 763 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 ZNF844Q08AG5 666 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 ATP1A4Q13733 1029 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 ELAVL1Q15717 326 aaKnown RBP6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 ADCK5Q3MIX3 580 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 C1QL3Q5VWW1 255 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 KLHL17Q6TDP4 642 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 TICAM2Q86XR7 235 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 PSD4Q8NDX1 1056 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 ASB12Q8WXK4 309 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 LRIG1Q96JA1 1093 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 RTKNQ9BST9 563 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 REXO4Q9GZR2 422 aaKnown RBP6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 MLXIPQ9HAP2 919 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 SPON1Q9HCB6 807 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 VPS51Q9UID3 782 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 SH3BP1Q9Y3L3 701 aa6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P47-201ENST00000511281 B9A039 149 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 HOXC11O43248 304 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 RAD17O75943 681 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 ACTL6BO94805 426 aa6.31□□□□□ -1.4
HMGB1P47-201ENST00000511281 ARP10275 920 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms