RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 KBTBD7Q8WVZ9 684 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 FGF14Q92915 247 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 MMS19Q96T76 1030 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 CORO1BQ9BR76 489 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 MRPL45Q9BRJ2 306 aaKnown RBP16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 CRACR2AQ9BSW2 395 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 INTS2Q9H0H0 1204 aaKnown RBP16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 SDCBP2Q9H190 292 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 DSEQ9UL01 958 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 DUSP12Q9UNI6 340 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 NUMBLQ9Y6R0 609 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 MOSPD3O75425 235 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 GJA1P17302 382 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 CDK11BP21127 795 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 PRSS36Q5K4E3 855 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 METTL23Q86XA0 190 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 UBALD2Q8IYN6 164 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 CCDC150Q8NCX0 1101 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 RNF214Q8ND24 703 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 TATDN2Q93075 761 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 NIF3L1Q9GZT8 377 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 ZCWPW1Q9H0M4 648 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 TMLHEQ9NVH6 421 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 GCNT4Q9P109 453 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 IGSF9Q9P2J2 1179 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 MRPS23Q9Y3D9 190 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 NME7Q9Y5B8 376 aa16.6■□□□□ 0.25
SH3TC1-220ENST00000511002 COL4A3Q01955 1670 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 PTPN2P17706 415 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 CDH8P55286 799 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 CETN1Q12798 172 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 SLC39A12Q504Y0 691 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 WDR44Q5JSH3 913 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 DPH6Q7L8W6 267 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 TMEM86AQ8N2M4 240 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 FBXL6Q8N531 539 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 ANKRD20A12PQ8NF67 263 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 MCRS1Q96EZ8 462 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 ARID3AQ99856 593 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 LRRC3Q9BY71 257 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 OXCT2Q9BYC2 517 aaPredicted RBP16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 BCO2Q9BYV7 579 aa16.59■□□□□ 0.25
SH3TC1-220ENST00000511002 GTPBP10A4D1E9 387 aaKnown RBP16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 LGALS16A8MUM7 142 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 GABRDO14764 452 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 TACC1O75410 805 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 CFHP08603 1231 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 P4HA1P13674 534 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 SLC9A1P19634 815 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 ACAT1P24752 427 aaKnown RBP16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 APBA1Q02410 837 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 IER5LQ5T953 404 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 GBP6Q6ZN66 633 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 TMC8Q8IU68 726 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 ARHGEF19Q8IW93 802 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 EHBP1Q8NDI1 1231 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 KXD1Q9BQD3 176 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 ZNF334Q9HCZ1 680 aaPredicted RBP16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 AVENQ9NQS1 362 aaPredicted RBP16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 DDX43Q9NXZ2 648 aaKnown RBP16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 HCN4Q9Y3Q4 1203 aa16.58■□□□□ 0.24
SH3TC1-220ENST00000511002 NCANO14594 1321 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 TPM2P07951 284 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 MYL4P12829 197 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 ATF6P18850 670 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 GPR15P49685 360 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 EPHA5P54756 1037 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 TPM4P67936 248 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 EXOC3L4Q17RC7 722 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 TRIM65Q6PJ69 517 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 THEM5Q8N1Q8 247 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 STKLD1Q8NE28 680 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 SPATA18Q8TC71 538 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 LPIN3Q9BQK8 851 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 PLA2G2FQ9BZM2 168 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 SNX25Q9H3E2 840 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 HMGXB4Q9UGU5 601 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 MAFFQ9ULX9 164 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 PTPRDP23468 1912 aa16.57■□□□□ 0.24
SH3TC1-220ENST00000511002 KRBA1A5PL33 1030 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 LRRC10BA6NIK2 292 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 NPR3P17342 541 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 CD58P19256 250 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 LMO2P25791 158 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 PON1P27169 355 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 LHX1P48742 406 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 KCNMA1Q12791 1236 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 ORC1Q13415 861 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 CUL2Q13617 745 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 CWF19L1Q69YN2 538 aaKnown RBP16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 PHLDB3Q6NSJ2 640 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 GJB7Q6PEY0 223 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 PDZD4Q76G19 769 aaPredicted RBP16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
SH3TC1-220ENST00000511002 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms