RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 CPB1P15086 417 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 LIFRP42702 1097 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 QARSP47897 775 aaKnown RBP10.49□□□□□ -0.73
PTPN20-221ENST00000509599 RPL6Q02878 288 aaKnown RBP10.49□□□□□ -0.73
PTPN20-221ENST00000509599 GRIK2Q13002 908 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 DUSP4Q13115 394 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 PLD1Q13393 1074 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 PLEKHG6Q3KR16 790 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 ZNF280DQ6N043 979 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 SLC41A1Q8IVJ1 513 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 CMTM8Q8IZV2 173 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 ZNF513Q8N8E2 541 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-221ENST00000509599 USP13Q92995 863 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-221ENST00000509599 PSMG2Q969U7 264 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 EXOC4Q96A65 974 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 NXPE2Q96DL1 559 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 PGLYRP2Q96PD5 576 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 TRIM4Q9C037 500 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 PDZD7Q9H5P4 517 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 ANKMY1Q9P2S6 941 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 GDAQ9Y2T3 454 aa10.49□□□□□ -0.73
PTPN20-221ENST00000509599 UTP20O75691 2785 aaKnown RBP10.49□□□□□ -0.73
PTPN20-221ENST00000509599 BOD1L1Q8NFC6 3051 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 A0A1W2PQD8 194 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 OR4Q2P0C623 313 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 GP1BBP13224 206 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 GLRA2P23416 452 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 RHDQ02161 417 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 CYP4A11Q02928 519 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 AGERQ15109 404 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 SGMS1Q86VZ5 419 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 CPA6Q8N4T0 437 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 TTC9BQ8N6N2 239 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 HMGB4Q8WW32 186 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 TSC1Q92574 1164 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 PNMA5Q96PV4 448 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 IL21RQ9HBE5 538 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTPN20-221ENST00000509599 NID2Q14112 1375 aa10.48□□□□□ -0.73
PTPN20-221ENST00000509599 FAM181BA6NEQ2 426 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 SGK1O00141 431 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 PODXLO00592 558 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 TRIM66O15016 1216 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 SOAT2O75908 522 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 FGF19O95750 216 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 F12P00748 615 aaPredicted RBP10.47□□□□□ -0.73
PTPN20-221ENST00000509599 YWHABP31946 246 aaKnown RBP10.47□□□□□ -0.73
PTPN20-221ENST00000509599 ARL2P36404 184 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 ALDH1A3P47895 512 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 USP11P51784 963 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 MYO1EQ12965 1108 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 BYSLQ13895 437 aaKnown RBP10.47□□□□□ -0.73
PTPN20-221ENST00000509599 PDGFRLQ15198 375 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 XKR9Q5GH70 373 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 PRICKLE2Q7Z3G6 844 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 SFTPA1Q8IWL2 248 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 SPACA3Q8IXA5 215 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 ALLCQ8N6M5 410 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 CCDC26Q8TAB7 109 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 ETNPPLQ8TBG4 499 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 CDC6Q99741 560 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 LRRC2Q9BYS8 371 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 USP20Q9Y2K6 914 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 ASB3Q9Y575 518 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 ITPR3Q14573 2671 aa10.47□□□□□ -0.73
PTPN20-221ENST00000509599 CACNA1DQ01668 2161 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 SPTBN1Q01082 2364 aaKnown RBP10.46□□□□□ -0.73
PTPN20-221ENST00000509599 N4BP3O15049 544 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 TDP2O95551 362 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 ZNF883P0CG24 379 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 MCM5P33992 734 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 OPRD1P41143 372 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.73
PTPN20-221ENST00000509599 SCRN1Q12765 414 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 PFKFB3Q16875 520 aaPredicted RBP10.46□□□□□ -0.73
PTPN20-221ENST00000509599 Q4G0T1 1027 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 EEF1DP3Q658K8 133 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 CENPPQ6IPU0 288 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 CC2D1AQ6P1N0 951 aaPredicted RBP10.46□□□□□ -0.73
PTPN20-221ENST00000509599 DHRS13Q6UX07 377 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 DBX2Q6ZNG2 339 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 C4orf19Q8IY42 314 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 TRIML1Q8N9V2 468 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 IL17RCQ8NAC3 791 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 TXNDC5Q8NBS9 432 aaKnown RBP10.46□□□□□ -0.73
PTPN20-221ENST00000509599 TTC9Q92623 222 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 PRIMPOLQ96LW4 560 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 HSPA12BQ96MM6 686 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 LNPKQ9C0E8 428 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 C6orf50Q9HD87 102 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 TDP1Q9NUW8 608 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 RBM28Q9NW13 759 aaKnown RBP10.46□□□□□ -0.73
PTPN20-221ENST00000509599 SRPK3Q9UPE1 567 aa10.46□□□□□ -0.73
PTPN20-221ENST00000509599 FNDC3AQ9Y2H6 1198 aaKnown RBP10.46□□□□□ -0.73
PTPN20-221ENST00000509599 ITPR2Q14571 2701 aa10.45□□□□□ -0.74
PTPN20-221ENST00000509599 SMIM28A0A1B0GU29 152 aa10.45□□□□□ -0.74
PTPN20-221ENST00000509599 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms