RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 STK32BQ9NY57 414 aa4.11□□□□□ -1.75
OTUD4-207ENST00000509517 XPR1Q9UBH6 696 aa4.11□□□□□ -1.75
OTUD4-207ENST00000509517 CPNE7Q9UBL6 633 aa4.11□□□□□ -1.75
OTUD4-207ENST00000509517 TMX2Q9Y320 296 aa4.11□□□□□ -1.75
OTUD4-207ENST00000509517 PCDHGB6Q9Y5F9 930 aa4.11□□□□□ -1.75
OTUD4-207ENST00000509517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.11□□□□□ -1.75
OTUD4-207ENST00000509517 MAST3O60307 1309 aa4.11□□□□□ -1.75
OTUD4-207ENST00000509517 DNAJC9-AS1A6NH13 148 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 F5H697 171 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 PROM1O43490 865 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 TBC1D4O60343 1298 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 ONECUT2O95948 504 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 ATXN1LP0C7T5 689 aaKnown RBP4.1□□□□□ -1.75
OTUD4-207ENST00000509517 BRAFP15056 766 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 PPP3CBP16298 524 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 SEC24CP53992 1094 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 WNT3P56703 355 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 LOXL3P58215 753 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 SLC13A2Q13183 592 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 HLTFQ14527 1009 aaKnown RBP eCLIP4.1□□□□□ -1.75
OTUD4-207ENST00000509517 IQCB1Q15051 598 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 CNGA2Q16280 664 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 PRR16Q569H4 304 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
OTUD4-207ENST00000509517 CCDC181Q5TID7 509 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 VWA1Q6PCB0 445 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 FAM109AQ8N4B1 249 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 SLC44A3Q8N4M1 653 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 SLC15A4Q8N697 577 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 ZNF366Q8N895 744 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 SUPT20HQ8NEM7 779 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 SLC30A5Q8TAD4 765 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 LPIN2Q92539 896 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 MOGAT1Q96PD6 335 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 AIFM2Q9BRQ8 373 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 SARGQ9BW04 601 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 BRIP1Q9BX63 1249 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 DMTF1Q9Y222 760 aa4.1□□□□□ -1.75
OTUD4-207ENST00000509517 TRIM43BA6NCK2 446 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 TMEM233B4DJY2 109 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 MYO1CO00159 1063 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 PRC1O43663 620 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 TRIAP1O43715 76 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 ESRRBO95718 433 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 CYP2C9P11712 490 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 TRIM27P14373 513 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 CD6P30203 668 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 MPLP40238 635 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 HNRNPMP52272 730 aaKnown RBP eCLIP4.09□□□□□ -1.75
OTUD4-207ENST00000509517 TBX4P57082 545 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 LILRA4P59901 499 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 FMO1Q01740 532 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 MPP3Q13368 585 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 RAB32Q13637 225 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 TMEM108Q6UXF1 575 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 Q6ZNX1 250 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 SESTD1Q86VW0 696 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 MICU3Q86XE3 530 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 KRT78Q8N1N4 520 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 BOLLQ8N9W6 283 aaKnown RBP4.09□□□□□ -1.75
OTUD4-207ENST00000509517 SIMC1Q8NDZ2 872 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 MYCBPAPQ8TBZ2 947 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 CAVIN3Q969G5 261 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 TRIM43Q96BQ3 446 aaPredicted RBP4.09□□□□□ -1.75
OTUD4-207ENST00000509517 NMD3Q96D46 503 aaKnown RBP4.09□□□□□ -1.75
OTUD4-207ENST00000509517 MESP1Q9BRJ9 268 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 ZNF518BQ9C0D4 1074 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 BTBD1Q9H0C5 482 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 KIAA1586Q9HCI6 787 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 SACM1LQ9NTJ5 587 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 AFF4Q9UHB7 1163 aaKnown RBP4.09□□□□□ -1.75
OTUD4-207ENST00000509517 OGDHLQ9ULD0 1010 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 PAXBP1Q9Y5B6 917 aa4.09□□□□□ -1.75
OTUD4-207ENST00000509517 CAND2O75155 1236 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 MAP4K4O95819 1239 aaPredicted RBP4.08□□□□□ -1.76
OTUD4-207ENST00000509517 XRCC6P12956 609 aaKnown RBP eCLIP4.08□□□□□ -1.76
OTUD4-207ENST00000509517 FOLR3P41439 243 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 PXNP49023 591 aaPredicted RBP4.08□□□□□ -1.76
OTUD4-207ENST00000509517 GPR162Q16538 588 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 SLC44A4Q53GD3 710 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 COBLL1Q53SF7 1204 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 C3orf38Q5JPI3 329 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 VPS53Q5VIR6 699 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 DCAF12L1Q5VU92 463 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 KIAA0895LQ68EN5 471 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 LAYNQ6UX15 382 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 TSHZ1Q6ZSZ6 1077 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 GAS2L3Q86XJ1 694 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 MPP5Q8N3R9 675 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
OTUD4-207ENST00000509517 B3GALNT2Q8NCR0 500 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 OR56A3Q8NH54 315 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 FAM136AQ96C01 138 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 APOL5Q9BWW9 433 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 AMBRA1Q9C0C7 1298 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 MS4A7Q9GZW8 240 aaPredicted RBP4.08□□□□□ -1.76
OTUD4-207ENST00000509517 NUP62CLQ9H1M0 184 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 ZNF287Q9HBT7 754 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 COL20A1Q9P218 1284 aa4.08□□□□□ -1.76
OTUD4-207ENST00000509517 SHOC2Q9UQ13 582 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms