RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
TPM3-219ENST00000509409 HCRTO43612 131 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 PDGFRBP09619 1106 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
TPM3-219ENST00000509409 TNNI1P19237 187 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 RUNX3Q13761 415 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 LPAL2Q16609 132 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 FAM26FQ5R3K3 315 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 SHC4Q6S5L8 630 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 C4orf50Q6ZRC1 276 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 DGLUCYQ7Z3D6 616 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 MON1AQ86VX9 555 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 USP13Q92995 863 aaPredicted RBP16.49■□□□□ 0.23
TPM3-219ENST00000509409 SNX21Q969T3 373 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 KIF9Q9HAQ2 790 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 CCL26Q9Y258 94 aa16.49■□□□□ 0.23
TPM3-219ENST00000509409 CHURC1-FNTBB4DL54 471 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 GABRDO14764 452 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 ATP2C2O75185 946 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 TDGF1P13385 188 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
TPM3-219ENST00000509409 LMO2P25791 158 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 HOXD13P35453 343 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 ME1P48163 572 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 FNTBP49356 437 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 CYP2J2P51589 502 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 AMPD2Q01433 879 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 PUM1Q14671 1186 aaKnown RBP eCLIP16.48■□□□□ 0.231e-11■■□□□ 13.1
TPM3-219ENST00000509409 HEATR6Q6AI08 1181 aaKnown RBP16.48■□□□□ 0.23
TPM3-219ENST00000509409 TRIM68Q6AZZ1 485 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 Q6ZS52 159 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 UNC13DQ70J99 1090 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 WDR49Q8IV35 697 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 FUBP3Q96I24 572 aaKnown RBP eCLIP16.48■□□□□ 0.23
TPM3-219ENST00000509409 SYT15Q9BQS2 421 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 BLZF1Q9H2G9 400 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 EBF3Q9H4W6 596 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 CDH9Q9ULB4 789 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 USP18Q9UMW8 372 aa16.48■□□□□ 0.23
TPM3-219ENST00000509409 PTPRJQ12913 1337 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 SOBPA7XYQ1 873 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 NOL4O94818 638 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 ZSCAN22P10073 491 aaPredicted RBP16.47■□□□□ 0.23
TPM3-219ENST00000509409 CASP1P29466 404 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 GRIK1P39086 918 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 AFMP43652 599 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 PSMC1P62191 440 aaKnown RBP16.47■□□□□ 0.23
TPM3-219ENST00000509409 CYP27A1Q02318 531 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 GRSF1Q12849 480 aaKnown RBP eCLIP16.47■□□□□ 0.23
TPM3-219ENST00000509409 SIM2Q14190 667 aaPredicted RBP16.47■□□□□ 0.23
TPM3-219ENST00000509409 SNRNP35Q16560 246 aaKnown RBP16.47■□□□□ 0.23
TPM3-219ENST00000509409 CCDC142Q17RM4 750 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 RSPO4Q2I0M5 234 aaPredicted RBP16.47■□□□□ 0.23
TPM3-219ENST00000509409 CFAP221Q4G0U5 840 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 FAM171BQ6P995 826 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 EPM2AIP1Q7L775 607 aaPredicted RBP16.47■□□□□ 0.23
TPM3-219ENST00000509409 HS2ST1Q7LGA3 356 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 SYNPOQ8N3V7 929 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 CYP2S1Q96SQ9 504 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 PKMYT1Q99640 499 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 FAM83CQ9BQN1 747 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 MAGEF1Q9HAY2 307 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 SLC39A2Q9NP94 309 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 AGPAT3Q9NRZ7 376 aa16.47■□□□□ 0.23
TPM3-219ENST00000509409 ANK1P16157 1881 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 TRAV19A0A0A6YYK7 116 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 TGFB1I1O43294 461 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 F13A1P00488 732 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
TPM3-219ENST00000509409 USP17L7P0C7H9 530 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 WARSP23381 471 aaKnown RBP16.46■□□□□ 0.23
TPM3-219ENST00000509409 BDNFP23560 247 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 ANXA13P27216 316 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 GNL1P36915 607 aaPredicted RBP16.46■□□□□ 0.23
TPM3-219ENST00000509409 SNRPFP62306 86 aaKnown RBP16.46■□□□□ 0.23
TPM3-219ENST00000509409 DMWDQ09019 674 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 TRPC3Q13507 836 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 MAPRE1Q15691 268 aaKnown RBP16.46■□□□□ 0.23
TPM3-219ENST00000509409 WDR44Q5JSH3 913 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 CNNM4Q6P4Q7 775 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 LONP2Q86WA8 852 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 XXYLT1Q8NBI6 393 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 OR6B3Q8NGW1 331 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 MYLPFQ96A32 169 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 TRMT2BQ96GJ1 504 aaKnown RBP16.46■□□□□ 0.23
TPM3-219ENST00000509409 HPS4Q9NQG7 708 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 PCDHA7Q9UN72 937 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 TICRRQ7Z2Z1 1910 aa16.46■□□□□ 0.23
TPM3-219ENST00000509409 GPR179Q6PRD1 2367 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 HRO43593 1189 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 PHACTR2O75167 634 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CLSTN1O94985 981 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CKMP06732 381 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 ARSAP15289 507 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 MAGEA11P43364 429 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms