RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FCARP24071 287 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 GCLMP48507 274 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 CREMQ03060 361 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 PTK2Q05397 1052 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 KCNH2Q12809 1159 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 NCOA4Q13772 614 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 SV2CQ496J9 727 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 INTS6LQ5JSJ4 861 aaKnown RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 STXBP5Q5T5C0 1151 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 SDHAF4Q5VUM1 108 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 KLHL10Q6JEL2 608 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 C11orf57Q6ZUT1 292 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 GRASPQ7Z6J2 395 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 PPFIBP1Q86W92 1011 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 TCEAL8Q8IYN2 117 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 ADGRF2Q8IZF7 708 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 CSGALNACT2Q8N6G5 542 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 TOP6BLQ8N6T0 577 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 ARMC2Q8NEN0 867 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 RIN3Q8TB24 985 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 GOLGA5Q8TBA6 731 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 WHAMMQ8TF30 809 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 NELFBQ8WX92 580 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 SLC35C1Q96A29 364 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 MYLPFQ96A32 169 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 RSPRY1Q96DX4 576 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 HPDLQ96IR7 371 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 ANKRD36BP1Q96IX9 119 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 MRGPRX2Q96LB1 330 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 PHF7Q9BWX1 381 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 EPHX3Q9H6B9 360 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 MMRN2Q9H8L6 949 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 KIAA1586Q9HCI6 787 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 WDR6Q9NNW5 1121 aaKnown RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 RMND1Q9NWS8 449 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 ZDHHC7Q9NXF8 308 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 STK39Q9UEW8 545 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 AFF4Q9UHB7 1163 aaKnown RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 MUTYHQ9UIF7 546 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 AJAP1Q9UKB5 411 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 MYO15AQ9UKN7 3530 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 FSD2A1L4K1 749 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 FAM86C2PA6NEL3 165 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 OR6C75A6NL08 312 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 SLC16A3O15427 465 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ST8SIA5O15466 376 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 CALUO43852 315 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 SMC2O95347 1197 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 C1RP00736 705 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ASS1P00966 412 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 TNNC2P02585 160 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 CPB1P15086 417 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ATF2P15336 505 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 GJA1P17302 382 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 TNNI1P19237 187 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 HOXA9P31269 272 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 VAMP7P51809 220 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 EPHA5P54756 1037 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 CDH8P55286 799 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 RBP5P82980 135 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 APBA1Q02410 837 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ITIH3Q06033 890 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ADCY1Q08828 1119 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 TWF1Q12792 350 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 GPR17Q13304 367 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 DUOXA2Q1HG44 320 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 SLC39A12Q504Y0 691 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 DPY19L2P1Q6NXN4 242 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 FAM171BQ6P995 826 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 DNAJC14Q6Y2X3 702 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 PAQR9Q6ZVX9 377 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 GET4Q7L5D6 327 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 TMEM150AQ86TG1 271 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 RNF135Q8IUD6 432 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 TRIM59Q8IWR1 403 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 NPAS3Q8IXF0 933 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 GJD3Q8N144 294 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 DEPDC4Q8N2C3 294 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 APPL2Q8NEU8 664 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF461Q8TAF7 563 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 LMO3Q8TAP4 145 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 SHKBP1Q8TBC3 707 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 HDAC7Q8WUI4 952 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 RSAD2Q8WXG1 361 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 SMG7Q92540 1137 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 KAT5Q92993 513 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 RPGRIP1Q96KN7 1286 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 RPP25Q9BUL9 199 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ELOVL4Q9GZR5 314 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 NUP62CLQ9H1M0 184 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 HSD3B7Q9H2F3 369 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 PLEKHA4Q9H4M7 779 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 DDX43Q9NXZ2 648 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 SSX2IPQ9Y2D8 614 aa7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 NUP210Q8TEM1 1887 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF318Q5VUA4 2279 aa7.71□□□□□ -1.17
TOPBP1-207ENST00000509162 VPS13AQ96RL7 3174 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms