RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NANOS1Q8WY41 292 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PTPRN2Q92932 1015 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 HDAC10Q969S8 669 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 B3GALT6Q96L58 329 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DPH2Q9BQC3 489 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PAIP1Q9H074 479 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SLC25A18Q9H1K4 315 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 VPS16Q9H269 839 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ECHDC1Q9NTX5 307 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 NDUFA13Q9P0J0 144 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZMAT5Q9UDW3 170 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 C2CD2Q9Y426 696 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PDS5AQ29RF7 1337 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PSME4Q14997 1843 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 A0A087WV62 115 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PGPEP1LA6NFU8 196 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ARHGAP42A6NI28 874 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 FAM47E-STBD1D6RA91 191 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 BIN1O00499 593 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GPC4O75487 556 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MOCS3O95396 460 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 BUD31P41223 144 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ALDH9A1P49189 494 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 BMXP51813 675 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PRKCEQ02156 737 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CNN3Q15417 329 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 IRGCQ6NXR0 463 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 FAM111BQ6SJ93 734 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF765Q7L2R6 523 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GALNT15Q8N3T1 639 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TEX9Q8N6V9 391 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 LRRC20Q8TCA0 184 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ST8SIA4Q92187 359 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 COA7Q96BR5 231 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TEX12Q9BXU0 123 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 IMPG2Q9BZV3 1241 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 NYXQ9GZU5 481 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PREBQ9HCU5 417 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PAG1Q9NWQ8 432 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 R3HDM2Q9Y2K5 976 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 COA3Q9Y2R0 106 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 USP16Q9Y5T5 823 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZMYM6O95789 1325 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MROH5Q6ZUA9 1318 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 AQP12BA6NM10 295 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SURF6O75683 361 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 AKR7A3O95154 331 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CHMLP26374 656 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GALNSP34059 522 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SOX18P35713 384 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 STK4Q13043 487 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SEC23AQ15436 765 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TSTQ16762 297 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 INTS6LQ5JSJ4 861 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 KHDC1LQ5JSQ8 128 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GKAP1Q5VSY0 366 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ANKRD40Q6AI12 368 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MCTP2Q6DN12 878 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 LAYNQ6UX15 382 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 KRT27Q7Z3Y8 459 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CROCCP3Q8IVE0 287 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GJD3Q8N144 294 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SMARCC2Q8TAQ2 1214 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TRMT2BQ96GJ1 504 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 HEPHQ9BQS7 1158 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MRPL46Q9H2W6 279 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TDP1Q9NUW8 608 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PKD2L2Q9NZM6 624 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 HMG20BQ9P0W2 317 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ACTR3BQ9P1U1 418 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 LARSQ9P2J5 1176 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MSRAQ9UJ68 235 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PRELID1Q9Y255 219 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 NAV1Q8NEY1 1877 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 CCDC78A2IDD5 438 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 PRAMEF22A3QJZ6 481 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 STXBP3O00186 592 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 ITGAVP06756 1048 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 MYBL1P10243 752 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 MYL6BP14649 208 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 ALDH18A1P54886 795 aaKnown RBP4.11□□□□□ -1.75
NEDD4-209ENST00000508871 RUNX2Q13950 521 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 SPIDRQ14159 915 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 SMAD2Q15796 467 aaKnown RBP4.11□□□□□ -1.75
NEDD4-209ENST00000508871 FAM98CQ17RN3 349 aaKnown RBP4.11□□□□□ -1.75
NEDD4-209ENST00000508871 SPECC1LQ69YQ0 1117 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 AFTPHQ6ULP2 937 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 MACC1Q6ZN28 852 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 CCDC116Q8IYX3 515 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 ADGRG2Q8IZP9 1017 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 AGGF1Q8N302 714 aaeCLIP4.11□□□□□ -1.75
NEDD4-209ENST00000508871 MDM1Q8TC05 714 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 INPP5DQ92835 1189 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 CEP295NLQ96MC4 621 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 SLC6A18Q96N87 628 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 ETNK1Q9HBU6 452 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 GJB4Q9NTQ9 266 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 IL1RAPL1Q9NZN1 696 aa4.11□□□□□ -1.75
NEDD4-209ENST00000508871 PCDHA6Q9UN73 950 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms