RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM6-205	ENST00000507449	SELENOO	Q9BVL4	669 aa		4.17	□□□□□ -1.74
LSM6-205	ENST00000507449	STK33	Q9BYT3	514 aa		4.17	□□□□□ -1.74
LSM6-205	ENST00000507449	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.17	□□□□□ -1.74
LSM6-205	ENST00000507449	ZNF212	Q9UDV6	495 aa		4.17	□□□□□ -1.74
LSM6-205	ENST00000507449	CAPN11	Q9UMQ6	739 aa		4.17	□□□□□ -1.74
LSM6-205	ENST00000507449	MRPS17	Q9Y2R5	130 aa	Known RBP	4.17	□□□□□ -1.74
LSM6-205	ENST00000507449	TESMIN	Q9Y4I5	508 aa		4.17	□□□□□ -1.74
LSM6-205	ENST00000507449	LOC102723971	A0A1B0GUV8	181 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	GAGE12B	A1L429	117 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	FAM234B	A2RU67	622 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	GAGE12H	A6NDE8	117 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	RAB27B	O00194	218 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	RNASET2	O00584	256 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	ADAMTS3	O15072	1205 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	CCP110	O43303	1012 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	RRP9	O43818	475 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	PIP5K1C	O60331	668 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	NBN	O60934	754 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	ERN1	O75460	977 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	RECQL4	O94761	1208 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	XRCC6	P12956	609 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	ZNF20	P17024	532 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	PDIA3	P30101	505 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	TEC	P42680	631 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	MAGEA10	P43363	369 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	NDUFV1	P49821	464 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	GALNT1	Q10472	559 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	EFEMP1	Q12805	493 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	MYO1E	Q12965	1108 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	REST	Q13127	1097 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	TRIM14	Q14142	442 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	ARHGEF7	Q14155	803 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	SLC29A2	Q14542	456 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	USP39	Q53GS9	565 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	VPS53	Q5VIR6	699 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	PLAG1	Q6DJT9	500 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	FOXR2	Q6PJQ5	311 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	BEND5	Q7L4P6	421 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	CLNK	Q7Z7G1	428 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	TXLNB	Q8N3L3	684 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	GLIS1	Q8NBF1	620 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	CPEB3	Q8NE35	698 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	CYP2W1	Q8TAV3	490 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	ZNF566	Q969W8	418 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	TMEM125	Q96AQ2	219 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	RNF31	Q96EP0	1072 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	BOD1	Q96IK1	185 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	C1QTNF3	Q9BXJ4	246 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	ALOXE3	Q9BYJ1	711 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	DHX36	Q9H2U1	1008 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	CXorf36	Q9H7Y0	433 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	UNKL	Q9H9P5	680 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	PPCS	Q9HAB8	311 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	TMEM74B	Q9NUR3	256 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	RNF181	Q9P0P0	153 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	DKK4	Q9UBT3	224 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	HDAC9	Q9UKV0	1011 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	SSX2IP	Q9Y2D8	614 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	LRCH1	Q9Y2L9	728 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	MTO1	Q9Y2Z2	717 aa	Known RBP	4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	CDY1	Q9Y6F8	540 aa		4.16	□□□□□ -1.74
LSM6-205	ENST00000507449	TMEM200C	A6NKL6	621 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	KCNQ3	O43525	872 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	LPXN	O60711	386 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	NDUFA10	O95299	355 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	CSF1R	P07333	972 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	C1S	P09871	688 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	MYL4	P12829	197 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	ITGAL	P20701	1170 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	KCNA3	P22001	575 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	GATA3	P23771	443 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	NPTX2	P47972	431 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	PTDSS1	P48651	473 aa	Known RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	PXN	P49023	591 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	ALDH9A1	P49189	494 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	CPT1A	P50416	773 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	DGKE	P52429	567 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	VAV2	P52735	878 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	HMGA2	P52926	109 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	ADAM17	P78536	824 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	SP2	Q02086	613 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	KCNAB1	Q14722	419 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	HLX	Q14774	488 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	PTCHD3	Q3KNS1	767 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	INO80D	Q53TQ3	878 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	RBM20	Q5T481	1227 aa	Known RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	CCDC174	Q6PII3	467 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	KIAA0408	Q6ZU52	694 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	KRT28	Q7Z3Y7	464 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	MYLK4	Q86YV6	388 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	C1orf210	Q8IVY1	113 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	YAF2	Q8IY57	180 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	SYTL1	Q8IYJ3	562 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	SDR16C5	Q8N3Y7	309 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	ZNF276	Q8N554	614 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	BPIFB1	Q8TDL5	484 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	ZNF384	Q8TF68	577 aa		4.15	□□□□□ -1.75
LSM6-205	ENST00000507449	DVL3	Q92997	716 aa	Predicted RBP	4.15	□□□□□ -1.75

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