RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CCDC43Q96MW1 224 aaKnown RBP7.87□□□□□ -1.15
VCAN-207ENST00000507162 LGMNQ99538 433 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 NFKBIZQ9BYH8 718 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 FZD8Q9H461 694 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 ZSWIM4Q9H7M6 989 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 KIF9Q9HAQ2 790 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 SLC38A7Q9NVC3 462 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 PCDHB8Q9UN66 801 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 CYP8B1Q9UNU6 501 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 BTBD3Q9Y2F9 522 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 FNDC3AQ9Y2H6 1198 aaKnown RBP7.87□□□□□ -1.15
VCAN-207ENST00000507162 PCDH15Q96QU1 1955 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 HELZP42694 1942 aaKnown RBP7.87□□□□□ -1.15
VCAN-207ENST00000507162 CENPEQ02224 2701 aa7.87□□□□□ -1.15
VCAN-207ENST00000507162 IGHV1OR15-9A0A0B4J2B8 117 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 A0A1B0GTW7 788 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 MTMR11A4FU01 709 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 MYMKA6NI61 221 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 OR6C75A6NL08 312 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 FLRT2O43155 660 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 DGAT1O75907 488 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 CER1O95813 267 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 CDC27P30260 824 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 RPL9P32969 192 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 HNF1BP35680 557 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 WASP42768 502 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 CCR10P46092 362 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 SLC6A11P48066 632 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 UBAP2LQ14157 1087 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 EPHA7Q15375 998 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 EML3Q32P44 896 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 DCAF4L1Q3SXM0 396 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 PKDCCQ504Y2 493 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 NCAPH2Q6IBW4 605 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 ARMCX5Q6P1M9 558 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 APOA5Q6Q788 366 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 SNIP1Q8TAD8 396 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 BAHD1Q8TBE0 780 aaPredicted RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 RUFY2Q8WXA3 655 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 MRPS31Q92665 395 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 ZNF419Q96HQ0 510 aaPredicted RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 ZMAT2Q96NC0 199 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 ACAP3Q96P50 834 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 CYP2S1Q96SQ9 504 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 TRPC7Q9HCX4 862 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 GPRC5CQ9NQ84 441 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 CALCOCO1Q9P1Z2 691 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 ZMYM5Q9UJ78 669 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 MAGED2Q9UNF1 606 aaPredicted RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 RBM8AQ9Y5S9 174 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 SPTBN1Q01082 2364 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 ZNF638Q14966 1978 aaKnown RBP7.86□□□□□ -1.15
VCAN-207ENST00000507162 PTPRDP23468 1912 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 CEP192Q8TEP8 1941 aa7.86□□□□□ -1.15
VCAN-207ENST00000507162 BOD1L1Q8NFC6 3051 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 TNRC6BQ9UPQ9 1833 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 ITPR2Q14571 2701 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 TRIP11Q15643 1979 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 CYP3A7-CYP3A51PA0A087WV96 503 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 MEI4A8MW99 385 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 BRINP1O60477 761 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 USO1O60763 962 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 ADAM23O75077 832 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 OAZ2O95190 189 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 APODP05090 189 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 ZNF883P0CG24 379 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 GABRG2P18507 467 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 CYP3A7P24462 503 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 DDX6P26196 483 aaKnown RBP eCLIP7.85□□□□□ -1.15
VCAN-207ENST00000507162 ACTN2P35609 894 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 ADD1P35611 737 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 TUFMP49411 452 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 TMPRSS3P57727 454 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 NLRP5P59047 1200 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 AKAP17AQ02040 695 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 DMP1Q13316 513 aaPredicted RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 PPP2R5CQ13362 524 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 PTPRNQ16849 979 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 FAM187BQ17R55 369 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 DSTYKQ6XUX3 929 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 DBX2Q6ZNG2 339 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 USP49Q70CQ1 688 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 MON1AQ86VX9 555 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 ZCCHC9Q8N567 271 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 ENGASEQ8NFI3 743 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 TTC9Q92623 222 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 FAM212AQ96EL1 285 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 YTHDC1Q96MU7 727 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 CCDC94Q9BW85 323 aaPredicted RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 TOPORSQ9NS56 1045 aaPredicted RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 GMIPQ9P107 970 aa7.85□□□□□ -1.15
VCAN-207ENST00000507162 DDX25Q9UHL0 483 aaKnown RBP7.85□□□□□ -1.15
VCAN-207ENST00000507162 A0A1B0GVT2 93 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 ACKR2O00590 384 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 KCNK3O14649 394 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 ZNF217O75362 1048 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 KAT7O95251 611 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms