RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ADCY1Q08828 1119 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 MTA1Q13330 715 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 NR1I3Q14994 352 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 SMAD2Q15796 467 aaKnown RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 CNGA2Q16280 664 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 SGO2Q562F6 1265 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 KLHDC7AQ5VTJ3 777 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 PRSS55Q6UWB4 352 aaPredicted RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 TRIM72Q6ZMU5 477 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 SPRED2Q7Z698 418 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 ADGRD2Q7Z7M1 963 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 FAM71AQ8IYT1 594 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 ZNF397Q8NF99 534 aaPredicted RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 NEK11Q8NG66 645 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 OR10T2Q8NGX3 314 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 HSFY1Q96LI6 401 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 ZNF512Q96ME7 567 aaPredicted RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 TTLL2Q9BWV7 592 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 NAA15Q9BXJ9 866 aaKnown RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 S1PR5Q9H228 398 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 SMYD3Q9H7B4 428 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 WDR6Q9NNW5 1121 aaKnown RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 DMAP1Q9NPF5 467 aaPredicted RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 CLDND1Q9NY35 253 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 GDE1Q9NZC3 331 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 IL37Q9NZH6 218 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 HESX1Q9UBX0 185 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 SIK3Q9Y2K2 1263 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 CEP83Q9Y592 693 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 BZW2Q9Y6E2 419 aaKnown RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 FAM92AA1XBS5 289 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 SPDYE4A6NLX3 237 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 I3L4J1 428 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 RFXAPO00287 272 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 PES1O00541 588 aaKnown RBP8.98□□□□□ -0.97
PDGFC-205ENST00000506880 GFPT2O94808 682 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 NOL4O94818 638 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 CLSTN1O94985 981 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 LSM8O95777 96 aaKnown RBP8.98□□□□□ -0.97
PDGFC-205ENST00000506880 TPM1P09493 284 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 FAM200BP0CF97 657 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 CA8P35219 290 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 LTBRP36941 435 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 ACADSBP45954 432 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 UBASH3AP57075 661 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 SLC39A12Q504Y0 691 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 CYP4A22Q5TCH4 519 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 SNX30Q5VWJ9 437 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 SYCE2Q6PIF2 218 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 LCLAT1Q6UWP7 414 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 BEND5Q7L4P6 421 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 OTOP3Q7RTS5 596 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 TADA2BQ86TJ2 420 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 DRC7Q8IY82 874 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 ARHGAP18Q8N392 663 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 ANKRD52Q8NB46 1076 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 MSANTD4Q8NCY6 345 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 ACSF2Q96CM8 615 aaPredicted RBP8.98□□□□□ -0.97
PDGFC-205ENST00000506880 PCED1BQ96HM7 432 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 FAM161BQ96MY7 647 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 GCNAQ96QF7 691 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 MRPL45Q9BRJ2 306 aaKnown RBP8.98□□□□□ -0.97
PDGFC-205ENST00000506880 DUSP16Q9BY84 665 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 LHX5Q9H2C1 402 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 MMRN2Q9H8L6 949 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 CYP4F11Q9HBI6 524 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 UBE2TQ9NPD8 197 aaPredicted RBP8.98□□□□□ -0.97
PDGFC-205ENST00000506880 ASAH2Q9NR71 780 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 OBP2AQ9NY56 170 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 CLEC1BQ9P126 229 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 CACNG4Q9UBN1 327 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 YIPF1Q9Y548 306 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 NUP210Q8TEM1 1887 aaPredicted RBP8.98□□□□□ -0.97
PDGFC-205ENST00000506880 COL6A3P12111 3177 aa8.98□□□□□ -0.97
PDGFC-205ENST00000506880 ANAPC1Q9H1A4 1944 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 NOTCH4Q99466 2003 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 CCDC195A0A1B0GUA6 201 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 GRXCR2A6NFK2 248 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 TBX10O75333 385 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 FBXO21O94952 628 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 WEE2P0C1S8 567 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 TCF3P15923 654 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 NPR3P17342 541 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 ACO1P21399 889 aaKnown RBP8.97□□□□□ -0.97
PDGFC-205ENST00000506880 SCNN1AP37088 669 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 STAT1P42224 750 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 PLA2G4AP47712 749 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 RPL34P49207 117 aaKnown RBP8.97□□□□□ -0.97
PDGFC-205ENST00000506880 RAD23BP54727 409 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 FANCCQ00597 558 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 BST2Q10589 180 aaKnown RBP8.97□□□□□ -0.97
PDGFC-205ENST00000506880 CBX2Q14781 532 aaPredicted RBP8.97□□□□□ -0.97
PDGFC-205ENST00000506880 PHLDB3Q6NSJ2 640 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 KLHDC10Q6PID8 442 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 TMEM270Q6UE05 265 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 RSPO2Q6UXX9 243 aaPredicted RBP8.97□□□□□ -0.97
PDGFC-205ENST00000506880 RNF19BQ6ZMZ0 732 aa8.97□□□□□ -0.97
PDGFC-205ENST00000506880 LUZP1Q86V48 1076 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms