RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 RBBP8NLQ8NC74 664 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 NEK11Q8NG66 645 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 MSLNLQ96KJ4 702 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 HNRNPABQ99729 332 aaKnown RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 DNAI2Q9GZS0 605 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 CYP4F11Q9HBI6 524 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 KIAA1257Q9ULG3 409 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 PRUNE2Q8WUY3 3088 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 CBFA2T2O43439 604 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 C8AP07357 584 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 POU2F2P09086 479 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 VDRP11473 427 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 HOXB8P17481 243 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-210ENST00000506767 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
TCOF1-210ENST00000506767 CYP2F1P24903 491 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 MAGEA11P43364 429 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
TCOF1-210ENST00000506767 CDR1P51861 262 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 FIGNQ5HY92 759 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 PPP1R26Q5T8A7 1209 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-210ENST00000506767 LIN9Q5TKA1 542 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 ARHGAP17Q68EM7 881 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 ELMSAN1Q6PJG2 1045 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 FAM71AQ8IYT1 594 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 CMASQ8NFW8 434 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-210ENST00000506767 SLC7A14Q8TBB6 771 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 HEXIM2Q96MH2 286 aaKnown RBP13.65□□□□□ -0.22
TCOF1-210ENST00000506767 ZSWIM1Q9BR11 485 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 TTYH3Q9C0H2 523 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 S1PR5Q9H228 398 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 SFXN1Q9H9B4 322 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-210ENST00000506767 INSL5Q9Y5Q6 135 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 REV3LO60673 3130 aa13.65□□□□□ -0.22
TCOF1-210ENST00000506767 ITIH6Q6UXX5 1313 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 F8VZ95 297 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 CLDN5O00501 218 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 PRRG1O14668 218 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 RFPL2O75678 378 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 TPM3P06753 285 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
TCOF1-210ENST00000506767 CCDC130P13994 396 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 BDNFP23560 247 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 CLCN1P35523 988 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 CYP27A1Q02318 531 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 RAPGEF1Q13905 1077 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 PPM1LQ5SGD2 360 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 VSTM1Q6UX27 236 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 FAM35AQ86V20 835 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 C12orf76Q8N812 135 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-210ENST00000506767 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 TFAP2BQ92481 460 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 ZNF707Q96C28 371 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-210ENST00000506767 NUP58Q9BVL2 599 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 EDEM3Q9BZQ6 932 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 ZNF518BQ9C0D4 1074 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 UBE2ZQ9H832 354 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-210ENST00000506767 NLRC4Q9NPP4 1024 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 PRDM6Q9NQX0 595 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 FAM49BQ9NUQ9 324 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 COG5Q9UP83 839 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
TCOF1-210ENST00000506767 CCDC195A0A1B0GUA6 201 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 O00370 1275 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 CYP26A1O43174 497 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 SOAT2O75908 522 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 CALCAP01258 141 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 PNMA6AP0CW24 399 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-210ENST00000506767 KRT5P13647 590 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 ATF6P18850 670 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 CACNA2D1P54289 1103 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 CNGA2Q16280 664 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 MGAT5BQ3V5L5 792 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 SGO2Q562F6 1265 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 CYP26C1Q6V0L0 522 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 BAP1Q92560 729 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 HLA-CQ95604 372 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 CEP295NLQ96MC4 621 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 MED10Q9BTT4 135 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 CSNK1G1Q9HCP0 422 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 MYO6Q9UM54 1294 aa13.63□□□□□ -0.23
TCOF1-210ENST00000506767 A0A1W2PQJ5 194 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 BEST1O76090 585 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 LRG1P02750 347 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 CD19P15391 556 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 SOX5P35711 763 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 USP8P40818 1118 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 ALDH1A3P47895 512 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 GPR15P49685 360 aa13.62□□□□□ -0.23
TCOF1-210ENST00000506767 RPL10AP62906 217 aaKnown RBP13.62□□□□□ -0.23
TCOF1-210ENST00000506767 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms