RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 DCAF17Q5H9S7 520 aaPredicted RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 WDR44Q5JSH3 913 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 C1orf220Q5T0J3 134 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 SCARA3Q6AZY7 606 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 SASS6Q6UVJ0 657 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 OTOP3Q7RTS5 596 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 LIMS2Q7Z4I7 341 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 GRASPQ7Z6J2 395 aaPredicted RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 CREBRFQ8IUR6 639 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 ARMC2Q8NEN0 867 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 OR10T2Q8NGX3 314 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 ZNF707Q96C28 371 aaPredicted RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 TMEM209Q96SK2 561 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 ARID3AQ99856 593 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 DUSP9Q99956 384 aaKnown RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 RTP3Q9BQQ7 232 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 COL25A1Q9BXS0 654 aaPredicted RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 XYLT2Q9H1B5 865 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 POMKQ9H5K3 350 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 WDR6Q9NNW5 1121 aaKnown RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 RAB20Q9NX57 234 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.77□□□□□ -1.17
GYPB-206ENST00000506516 CDH9Q9ULB4 789 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 ASB3Q9Y575 518 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 PCDHB5Q9Y5E4 795 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 MTMR11A4FU01 709 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 A8MXQ7 604 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 LOC730098B7Z3J9 87 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 TNFRSF10AO00220 468 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 ZNF197O14709 1029 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 N4BP1O75113 896 aaKnown RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 VNN1O95497 513 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 ASS1P00966 412 aaKnown RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 PDGFRBP09619 1106 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 FSHRP23945 695 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 ACAT1P24752 427 aaKnown RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 LMO2P25791 158 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 ERCC5P28715 1186 aaPredicted RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 MXI1P50539 228 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 PPP3CAQ08209 521 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 TWF1Q12792 350 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 TAF12Q16514 161 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 MGAT5BQ3V5L5 792 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 INTS6LQ5JSJ4 861 aaKnown RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 CCDC183Q5T5S1 534 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 CYP4A22Q5TCH4 519 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 C4orf50Q6ZRC1 276 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 ITIH5Q86UX2 942 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 LRRTM3Q86VH5 581 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 SPATA2LQ8IUW3 424 aaPredicted RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 ATAD1Q8NBU5 361 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 LEMD2Q8NC56 503 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 FBXL13Q8NEE6 735 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 TAS1R2Q8TE23 839 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 FAXDC2Q96IV6 333 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 TNIP3Q96KP6 325 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 NECAB3Q96P71 396 aaPredicted RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 ABI2Q9NYB9 513 aaPredicted RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 MAGEC2Q9UBF1 373 aaPredicted RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 GTF3C4Q9UKN8 822 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.76□□□□□ -1.17
GYPB-206ENST00000506516 INSL5Q9Y5Q6 135 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 ZFP37Q9Y6Q3 630 aaPredicted RBP7.76□□□□□ -1.17
GYPB-206ENST00000506516 VCANP13611 3396 aa7.76□□□□□ -1.17
GYPB-206ENST00000506516 TRIP11Q15643 1979 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 P4HA2O15460 535 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 LETM1O95202 739 aaPredicted RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 FGF19O95750 216 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 ALADP13716 330 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 PTPN1P18031 435 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 GBP2P32456 591 aaPredicted RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 GGCXP38435 758 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 CDH8P55286 799 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 MARSP56192 900 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 RPL10AP62906 217 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 CYP27A1Q02318 531 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 VEPH1Q14D04 833 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 DPCR1Q3MIW9 517 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 CFAP221Q4G0U5 840 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 CBWD6Q4V339 395 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 PABPC1LQ4VXU2 614 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 CBWD3Q5JTY5 395 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 CBWD5Q5RIA9 395 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 FAM171BQ6P995 826 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 RBM43Q6ZSC3 357 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 PDZD4Q76G19 769 aaPredicted RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 UNC93AQ86WB7 457 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 OSTM1Q86WC4 334 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 FAM114A1Q8IWE2 563 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 ZDHHC14Q8IZN3 488 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 TTC39CQ8N584 583 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 TDRD5Q8NAT2 981 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 KBTBD7Q8WVZ9 684 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 GLMNQ92990 594 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 SLC35C1Q96A29 364 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 FUBP3Q96I24 572 aaKnown RBP eCLIP7.75□□□□□ -1.17
GYPB-206ENST00000506516 SEPT5Q99719 369 aaPredicted RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 SYT15Q9BQS2 421 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 CORO1BQ9BR76 489 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms