RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 RBM43Q6ZSC3 357 aaKnown RBP17.78■□□□□ 0.44
SNCA-209ENST00000506244 DNAJB7Q7Z6W7 309 aaPredicted RBP17.78■□□□□ 0.44
SNCA-209ENST00000506244 TMC8Q8IU68 726 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 FAM114A1Q8IWE2 563 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 TRIM59Q8IWR1 403 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 KHSRPQ92945 711 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNCA-209ENST00000506244 PCED1BQ96HM7 432 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 LPIN3Q9BQK8 851 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 GPR88Q9GZN0 384 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 KCNK12Q9HB15 430 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 APOBEC3GQ9HC16 384 aaKnown RBP17.78■□□□□ 0.44
SNCA-209ENST00000506244 EHD2Q9NZN4 543 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 UXTQ9UBK9 157 aaPredicted RBP17.78■□□□□ 0.44
SNCA-209ENST00000506244 ZMYM5Q9UJ78 669 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNCA-209ENST00000506244 ASGR2P07307 311 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 CYP2F1P24903 491 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 YWHAEP62258 255 aaKnown RBP17.77■□□□□ 0.44
SNCA-209ENST00000506244 ZXDAP98168 799 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 TDGQ13569 410 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 HTR4Q13639 388 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 ARHGAP15Q53QZ3 475 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 SCN4BQ8IWT1 228 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 HS6ST3Q8IZP7 471 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 EDAQ92838 391 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 CNOT6LQ96LI5 555 aaKnown RBP17.77■□□□□ 0.44
SNCA-209ENST00000506244 SDCBP2Q9H190 292 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 DPEP3Q9H4B8 488 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 SLITRK6Q9H5Y7 841 aa17.77■□□□□ 0.44
SNCA-209ENST00000506244 NOTCH4Q99466 2003 aa17.77■□□□□ 0.43
SNCA-209ENST00000506244 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 ANHXE9PGG2 379 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 AFPP02771 609 aaKnown RBP17.76■□□□□ 0.43
SNCA-209ENST00000506244 PTMSP20962 102 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 BDNFP23560 247 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 TBXAS1P24557 533 aaPredicted RBP17.76■□□□□ 0.43
SNCA-209ENST00000506244 GRIK1P39086 918 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 CCR2P41597 374 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 CDR1P51861 262 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 NDST1P52848 882 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 CCDC142Q17RM4 750 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 SASS6Q6UVJ0 657 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 GIPC2Q8TF65 315 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 SEMA4DQ92854 862 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 ELMO3Q96BJ8 720 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 TCEAL4Q96EI5 215 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 SPATA17Q96L03 361 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 NT5C1AQ9BXI3 368 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 LRRC3Q9BY71 257 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■■■■■ 149.1
SNCA-209ENST00000506244 NME7Q9Y5B8 376 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 PTPRDP23468 1912 aa17.76■□□□□ 0.43
SNCA-209ENST00000506244 A0A1W2PRU2 124 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 NOL4O94818 638 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 CD58P19256 250 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 GABRR2P28476 465 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 SIGLEC14Q08ET2 396 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 DDR2Q16832 855 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 CRYBG2Q8N1P7 616 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 SHKBP1Q8TBC3 707 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 MCRS1Q96EZ8 462 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 TRMT2BQ96GJ1 504 aaKnown RBP17.75■□□□□ 0.43
SNCA-209ENST00000506244 SMARCD1Q96GM5 515 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 NT5C1BQ96P26 610 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 MED10Q9BTT4 135 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 ATXN3LQ9H3M9 355 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 THAP9Q9H5L6 903 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 EPHX3Q9H6B9 360 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 ZNF334Q9HCZ1 680 aaPredicted RBP17.75■□□□□ 0.43
SNCA-209ENST00000506244 DUSP12Q9UNI6 340 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 NUMBLQ9Y6R0 609 aa17.75■□□□□ 0.43
SNCA-209ENST00000506244 CILPO75339 1184 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 DDX6P26196 483 aaKnown RBP eCLIP17.74■□□□□ 0.43
SNCA-209ENST00000506244 GPR15P49685 360 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 KCNH2Q12809 1159 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 CUL2Q13617 745 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 TEAD2Q15562 447 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 STX1AQ16623 288 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 TMEM31Q5JXX7 168 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 ACOT1Q86TX2 421 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 FAM35AQ86V20 835 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 C8orf48Q96LL4 319 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
SNCA-209ENST00000506244 ANO10Q9NW15 660 aa17.74■□□□□ 0.43
SNCA-209ENST00000506244 MAGED2Q9UNF1 606 aaPredicted RBP17.74■□□□□ 0.43
SNCA-209ENST00000506244 SLC38A8A6NNN8 435 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 GPR37L1O60883 481 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 ECI2O75521 394 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 SRFP11831 508 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 PRKCSHP14314 528 aaPredicted RBP17.73■□□□□ 0.43
SNCA-209ENST00000506244 MTIF2P46199 727 aaKnown RBP17.73■□□□□ 0.43
SNCA-209ENST00000506244 PARM1Q6UWI2 310 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 TRIM67Q6ZTA4 783 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 DENND5BQ6ZUT9 1274 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 GAREM2Q75VX8 874 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 CREBRFQ8IUR6 639 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 GPR152Q8TDT2 470 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 FGF14Q92915 247 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 SMARCD2Q92925 531 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 E2F7Q96AV8 911 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms