RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 CYP26B1Q9NR63 512 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SIX4Q9UIU6 781 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 AGTPBP1Q9UPW5 1226 aa6.34□□□□□ -1.39
SCLT1-207ENST00000506233 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 TPP1O14773 563 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 OPA1O60313 960 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 PYGMP11217 842 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 MRPS25P82663 173 aaKnown RBP6.34□□□□□ -1.4
SCLT1-207ENST00000506233 ITIH3Q06033 890 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 TTC27Q6P3X3 843 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 ALKAL1Q6UXT8 129 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 MMS22LQ6ZRQ5 1243 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 SLC41A1Q8IVJ1 513 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 OR13H1Q8NG92 308 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 OR5B17Q8NGF7 314 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 SH3GL2Q99962 352 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 LSM14BQ9BX40 385 aaKnown RBP6.34□□□□□ -1.4
SCLT1-207ENST00000506233 GDF3Q9NR23 364 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 ANKEF1Q9NU02 776 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 HSPBP1Q9NZL4 362 aa6.34□□□□□ -1.4
SCLT1-207ENST00000506233 CHORDC1Q9UHD1 332 aaPredicted RBP6.34□□□□□ -1.4
SCLT1-207ENST00000506233 PLXNA4Q9HCM2 1894 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 A0A096LPE4 126 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 A0A0B4J269 797 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 A0A1W2PPZ6 126 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 SGPL1O95470 568 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 ITGAVP06756 1048 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 HOXC6P09630 235 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 CCDC175P0C221 793 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 GRIK1P39086 918 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 POLR2FP61218 127 aaKnown RBP6.33□□□□□ -1.4
SCLT1-207ENST00000506233 ENPEPQ07075 957 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 SPAG1Q07617 926 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 RRAGAQ7L523 313 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 EFCAB13Q8IY85 973 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 TRPV1Q8NER1 839 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 DNERQ8NFT8 737 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 NPLOC4Q8TAT6 608 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 NACC1Q96RE7 527 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 TAAR9Q96RI9 348 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 RSPH9Q9H1X1 276 aaPredicted RBP6.33□□□□□ -1.4
SCLT1-207ENST00000506233 RBM12Q9NTZ6 932 aaKnown RBP6.33□□□□□ -1.4
SCLT1-207ENST00000506233 MYO6Q9UM54 1294 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 PCDHGB6Q9Y5F9 930 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 COL6A3P12111 3177 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 SLC16A4O15374 487 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 GAS7O60861 476 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 C22orf31O95567 290 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 PFKMP08237 780 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 CYP2C8P10632 490 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 IVDP26440 423 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 RPL6Q02878 288 aaKnown RBP6.33□□□□□ -1.4
SCLT1-207ENST00000506233 LLGL1Q15334 1064 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 RAB6CQ53S08 254 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 TNFAIP8L3Q5GJ75 292 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 GPR158Q5T848 1215 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 DAB2IPQ5VWQ8 1189 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 CFAP161Q6P656 301 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 GSPT2Q8IYD1 628 aaKnown RBP6.33□□□□□ -1.4
SCLT1-207ENST00000506233 TEKT3Q9BXF9 490 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 RAB6CQ9H0N0 254 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 ZCCHC17Q9NP64 241 aaKnown RBP6.33□□□□□ -1.4
SCLT1-207ENST00000506233 PKD2L1Q9P0L9 805 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 MYO1AQ9UBC5 1043 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 HOOK1Q9UJC3 728 aaKnown RBP6.33□□□□□ -1.4
SCLT1-207ENST00000506233 ALPK3Q96L96 1907 aa6.33□□□□□ -1.4
SCLT1-207ENST00000506233 GLTPD2A6NH11 291 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CYP1A1P04798 512 aaPredicted RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 SERPING1P05155 500 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PTMAP06454 111 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 EPHX1P07099 455 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 SETSIPP0DME0 302 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ITGA4P13612 1032 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TNFRSF8P28908 595 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PTGIRP43119 386 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PRKCEQ02156 737 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CYP24A1Q07973 514 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PPIL2Q13356 520 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PLCB4Q15147 1175 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF569Q5MCW4 686 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 C1orf122Q6ZSJ8 110 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 Q6ZVU0 165 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 MMGT1Q8N4V1 131 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ANKRD13CQ8N6S4 541 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF513Q8N8E2 541 aaPredicted RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TAS1R2Q8TE23 839 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 WNT8BQ93098 351 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 OPTNQ96CV9 577 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 OSBPL9Q96SU4 736 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 WDR83Q9BRX9 315 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TEX13BQ9BXU2 312 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 GRIP2Q9C0E4 1043 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 INTS2Q9H0H0 1204 aaKnown RBP6.32□□□□□ -1.4
SCLT1-207ENST00000506233 MAN1C1Q9NR34 630 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 ZDHHC18Q9NUE0 388 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 SEL1LQ9UBV2 794 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 EMSYQ7Z589 1322 aa6.32□□□□□ -1.4
SCLT1-207ENST00000506233 CHD5Q8TDI0 1954 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms