RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 CD59P13987 128 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 WEE1P30291 646 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 DHPSP49366 369 aaPredicted RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 MCM2P49736 904 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 DGKEP52429 567 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 RCAN1P53805 252 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 MCCD1P59942 119 aaPredicted RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 EXOSC10Q01780 885 aaKnown RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 FAM187BQ17R55 369 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 TMEM259Q4ZIN3 620 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 XKR9Q5GH70 373 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 CDCA2Q69YH5 1023 aaPredicted RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 MOXD1Q6UVY6 613 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 SLCO4C1Q6ZQN7 724 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 C11orf74Q86VG3 221 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 RASSF3Q86WH2 238 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 NOSTRINQ8IVI9 506 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 GOLGA6L1Q8N7Z2 621 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 RPLP0P6Q8NHW5 317 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 BICD2Q8TD16 824 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 EDARADDQ8WWZ3 215 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 UROC1Q96N76 676 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 UBL7Q96S82 380 aaPredicted RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 FAM83CQ9BQN1 747 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 TPSD1Q9BZJ3 242 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 LSG1Q9H089 658 aaKnown RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 FZD8Q9H461 694 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 GPAMQ9HCL2 828 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 FSCN3Q9NQT6 498 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 RAB6BQ9NRW1 208 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 TMEM74BQ9NUR3 256 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 NDFIP2Q9NV92 336 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 RGL1Q9NZL6 768 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 DKK4Q9UBT3 224 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 MBD1Q9UIS9 605 aaPredicted RBP7.67□□□□□ -1.18
VCAN-206ENST00000505615 USP20Q9Y2K6 914 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 RAI2Q9Y5P3 530 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 NID2Q14112 1375 aa7.67□□□□□ -1.18
VCAN-206ENST00000505615 AHCTF1Q8WYP5 2266 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 KLF18A0A0U1RQI7 1052 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 M0R2N6 131 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 N4BP3O15049 544 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 ATXN7O15265 892 aaPredicted RBP7.66□□□□□ -1.18
VCAN-206ENST00000505615 PRPF3O43395 683 aaKnown RBP7.66□□□□□ -1.18
VCAN-206ENST00000505615 TRAPPC3O43617 180 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 IGHDP01880 384 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 FURINP09958 794 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 FTH1P19P0C7X4 201 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 U2AF2P26368 475 aaKnown RBP eCLIP7.66□□□□□ -1.18
VCAN-206ENST00000505615 NR1H3Q13133 447 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 NECTIN1Q15223 517 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 EPHA7Q15375 998 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 CTXN3Q4LDR2 81 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 GPR158Q5T848 1215 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 PEAR1Q5VY43 1037 aaPredicted RBP7.66□□□□□ -1.18
VCAN-206ENST00000505615 CREB3L3Q68CJ9 461 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 TRIM68Q6AZZ1 485 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 SLC23A3Q6PIS1 610 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 OLIG1Q8TAK6 271 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 RIN3Q8TB24 985 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 DYDC2Q96IM9 177 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 NUSAP1Q9BXS6 441 aaKnown RBP7.66□□□□□ -1.18
VCAN-206ENST00000505615 POLR3FQ9H1D9 316 aaPredicted RBP7.66□□□□□ -1.18
VCAN-206ENST00000505615 SUV39H2Q9H5I1 410 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 KCNMB3Q9NPA1 279 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 GKN1Q9NS71 199 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 VPS54Q9P1Q0 977 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 TPCN1Q9ULQ1 816 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 MAFFQ9ULX9 164 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 TBX20Q9UMR3 447 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 GDAQ9Y2T3 454 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 ATXN2Q99700 1313 aaKnown RBP7.66□□□□□ -1.18
VCAN-206ENST00000505615 NOTCH2Q04721 2471 aa7.66□□□□□ -1.18
VCAN-206ENST00000505615 A0A087WV48 116 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 SMIM28A0A1B0GU29 152 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 ANTXRLA6NF34 631 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 MYO9AB2RTY4 2548 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 H7C4K7 107 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 PODXLO00592 558 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 TNFRSF10BO14763 440 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 HNRNPLP14866 589 aaKnown RBP eCLIP7.65□□□□□ -1.18
VCAN-206ENST00000505615 ARSAP15289 507 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 DRD1P21728 446 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 RDXP35241 583 aaKnown RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 PTGER3P43115 390 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 GALK1P51570 392 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 CYP4F8P98187 520 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 CENPCQ03188 943 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 RUNX3Q13761 415 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 CTTNQ14247 550 aaKnown RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 NPY5RQ15761 445 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 NTRK3Q16288 839 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 FBXO43Q4G163 708 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 USP39Q53GS9 565 aaKnown RBP7.65□□□□□ -1.18
VCAN-206ENST00000505615 ZNF280DQ6N043 979 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 OTUD6AQ7L8S5 288 aa7.65□□□□□ -1.18
VCAN-206ENST00000505615 SYT12Q8IV01 421 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms