RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZMYM5Q9UJ78 669 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 TBX20Q9UMR3 447 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 WASF3Q9UPY6 502 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 PCDHB6Q9Y5E3 794 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 ANK1P16157 1881 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 MYH11P35749 1972 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 NUP205Q92621 2012 aa7.44□□□□□ -1.22
NPIPB3-203ENST00000504841 ABCA7Q8IZY2 2146 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CFAP47Q6ZTR5 3102 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 THADAQ6YHU6 1953 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 TRAV19A0A0A6YYK7 116 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 SCAMP3O14828 347 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 TADA3O75528 432 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CYP11A1P05108 521 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CFIP05156 583 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CSH1P0DML2 217 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CSH2P0DML3 217 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 DDX6P26196 483 aaKnown RBP eCLIP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 TRAPPC10P48553 1259 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 ACOT2P49753 483 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 TAF6P49848 677 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 NEK4P51957 841 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 NCKAP1LP55160 1127 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 ANAPC15P60006 121 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 SIM1P81133 766 aaPredicted RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 TSPY1Q01534 308 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 FAM160A1Q05DH4 1040 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 USP4Q13107 963 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 PDIA5Q14554 519 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 DHX8Q14562 1220 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 ZNF77Q15935 545 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 IL17AQ16552 155 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CCDC142Q17RM4 750 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 ZC2HC1CQ53FD0 456 aaPredicted RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 LRSAM1Q6UWE0 723 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 DTHD1Q6ZMT9 781 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 LPCAT2Q7L5N7 544 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 C11orf74Q86VG3 221 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 SCN4BQ8IWT1 228 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 EFCAB13Q8IY85 973 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 TMEFF1Q8IYR6 380 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 DCP1BQ8IZD4 617 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 SH3RF2Q8TEC5 729 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 C2orf15Q8WU43 125 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 OSCP1Q8WVF1 389 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 SPACA7Q96KW9 195 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CNOT6LQ96LI5 555 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 PNMA5Q96PV4 448 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 SLC22A12Q96S37 553 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 CYP2S1Q96SQ9 504 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 NTPCRQ9BSD7 190 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 MMTAG2Q9BU76 263 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 GTPBP2Q9BX10 602 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 NUSAP1Q9BXS6 441 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 ZDHHC4Q9NPG8 344 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 BCCIPQ9P287 314 aaKnown RBP eCLIP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 LARSQ9P2J5 1176 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 EBF1Q9UH73 591 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 PCDHB5Q9Y5E4 795 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 ATRXP46100 2492 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 OBSL1O75147 1896 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 MYO16Q9Y6X6 1858 aa7.43□□□□□ -1.22
NPIPB3-203ENST00000504841 TCHHQ07283 1943 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 CHD6Q8TD26 2715 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 ANO9A1A5B4 782 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 SOBPA7XYQ1 873 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 TISP43B9A030 160 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 H0YCG3 227 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 PIRO00625 290 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 FAM189A1O60320 539 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 ALDH1A2O94788 518 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 FAM13AO94988 1023 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 KRT18P05783 430 aaKnown RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 USP17L7P0C7H9 530 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 PLA2G4BP0C869 781 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 ENGP17813 658 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 ACAT1P24752 427 aaKnown RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 CYP2F1P24903 491 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 PTGER3P43115 390 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 TOB1P50616 345 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 ATXN3P54252 364 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 SLC12A3P55017 1021 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 RPL10AP62906 217 aaKnown RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 SMARCB1Q12824 385 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 LMAN2Q12907 356 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 NR1H3Q13133 447 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 ZNF268Q14587 947 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 KCNB1Q14721 858 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 EML3Q32P44 896 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 SV2CQ496J9 727 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 C19orf48Q6RUI8 117 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 RASSF3Q86WH2 238 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 GPBP1Q86WP2 473 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 CD302Q8IX05 232 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 HDDC3Q8N4P3 179 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 DEFB119Q8N690 84 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 MYCT1Q8N699 235 aa7.42□□□□□ -1.22
NPIPB3-203ENST00000504841 FRMD1Q8N878 549 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms