RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 M6PRP20645 277 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 AP1S2P56377 157 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ATP6V0D1P61421 351 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TTC23LQ6PF05 361 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 DACT3Q96B18 629 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF512BQ96KM6 892 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TRIM51Q9BSJ1 452 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 THAP1Q9NVV9 213 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PHF24Q9UPV7 400 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 CLDN25C9JDP6 229 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SIN3BO75182 1162 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SERPINA6P08185 405 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ACCSLQ4AC99 568 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RSBN1Q5VWQ0 802 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 DNAJB8Q8NHS0 232 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 URGCPQ8TCY9 931 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF75CPQ92670 426 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RORBQ92753 470 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 VPS33AQ96AX1 596 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 CABP1Q9NZU7 370 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TRAFD1O14545 582 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SRGAP2O75044 1071 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 CAMTA2O94983 1202 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 NLRP6P59044 892 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SLC22A9Q8IVM8 553 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 C10orf107Q8IVU9 208 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 LARGE2Q8N3Y3 721 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 OR7A2PQ8NGA2 310 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ZSCAN10Q96SZ4 725 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 FICDQ9BVA6 458 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 MALT1Q9UDY8 824 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 GRIP1Q9Y3R0 1128 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TRIM13O60858 407 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CYP2C9P11712 490 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 FASP25445 335 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 HARS2P49590 506 aaKnown RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ANXA11P50995 505 aaKnown RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CYP4F8P98187 520 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TDGQ13569 410 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PIGHQ14442 188 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 POLNQ7Z5Q5 900 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TTC8Q8TAM2 541 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 NLRP4Q96MN2 994 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CPNE5Q9HCH3 593 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 F8W031 263 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 SGK1O00141 431 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TIMM44O43615 452 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PRKAR1AP10644 381 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PIK3R1P27986 724 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TRIQKQ629K1 86 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ERICH1Q86X53 443 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PAGE5Q96GU1 130 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TEKT5Q96M29 485 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 C7orf25Q9BPX7 421 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ECSITQ9BQ95 431 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CLPBQ9H078 707 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TNFRSF10DQ9UBN6 386 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 DUOX1Q9NRD9 1551 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ARHGEF33A8MVX0 844 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MAPK1P28482 360 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 DMP1Q13316 513 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TMC3Q7Z5M5 1100 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 AGR3Q8TD06 166 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ZBTB9Q96C00 473 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 RSPH9Q9H1X1 276 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 FAM86C1Q9NVL1 165 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 STK39Q9UEW8 545 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PCDHGC5Q9Y5F6 944 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 HSPD1P10809 573 aaKnown RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 GTF2H1P32780 548 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PSMC5P62195 406 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MEA1Q16626 185 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CHCHD4Q8N4Q1 142 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 FANCBQ8NB91 859 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 HAVCR1Q96D42 359 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 EMILIN1Q9Y6C2 1016 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PRPF4O43172 522 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 NR2F2P24468 414 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TBX2Q13207 712 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 UQCC2Q9BRT2 126 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PCDHGA10Q9Y5H3 936 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CEMIPQ8WUJ3 1361 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MYH13Q9UKX3 1938 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 IL6P05231 212 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 RPL17P18621 184 aaKnown RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ATP2B4P23634 1241 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 LONRF1Q17RB8 773 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PMF1Q6P1K2 205 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MYDGFQ969H8 173 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PTCD3Q96EY7 689 aaKnown RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 SPOCK3Q9BQ16 436 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 GANQ9H2C0 597 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 DNAAF2Q9NVR5 837 aaKnown RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 V9GYQ6 96 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TSPAN1O60635 241 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MAPKAPK2P49137 400 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 NCKAP1LP55160 1127 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 POLR2FP61218 127 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms