RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 HSD17B3P37058 310 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 SOX4Q06945 474 aaPredicted RBP22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 PPP1R26Q5T8A7 1209 aaPredicted RBP22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 TXNRD3NBQ6F5E7 133 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 TWF2Q6IBS0 349 aaKnown RBP22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 DPH6Q7L8W6 267 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 LIMS2Q7Z4I7 341 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 POLNQ7Z5Q5 900 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 RPAINQ86UA6 219 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 SERINC5Q86VE9 423 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 ARFGAP1Q8N6T3 406 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 RNF25Q96BH1 459 aaPredicted RBP22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 CENPFP49454 3210 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 PTPN7P35236 360 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 PNPLA4P41247 253 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 GOLGA7BQ2TAP0 167 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 ACOT1Q86TX2 421 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 RSPH3Q86UC2 560 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 ATG4AQ8WYN0 398 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 ZNF560Q96MR9 790 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 RUFY1Q96T51 708 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 SENP6Q9GZR1 1112 aaPredicted RBP22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 DDX56Q9NY93 547 aaKnown RBP22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 PTPN22Q9Y2R2 807 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 SPTLC1O15269 473 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 CETN2P41208 172 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 COPS2P61201 443 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 SLC25A11Q02978 314 aaKnown RBP22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 NOGQ13253 232 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 CCNG2Q16589 344 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 MFSD7Q6UXD7 560 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 SESTD1Q86VW0 696 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 KLHDC9Q8NEP7 349 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 IPO4Q8TEX9 1081 aaKnown RBP22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 KBTBD7Q8WVZ9 684 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 KLHL11Q9NVR0 708 aa22.5■■□□□ 1.19
UBE2D3-216ENST00000503742 KPNA7A9QM74 516 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 GOLGA8KD6RF30 607 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 PPFIA2O75334 1257 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 LRCH4O75427 683 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 CHRNA1P02708 482 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 KRT1P04264 644 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 MGAT3Q09327 533 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 SNX1Q13596 522 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 CCSAPQ6IQ19 270 aaPredicted RBP22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 TTC30AQ86WT1 665 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 EMC1Q8N766 993 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 FBXO25Q8TCJ0 367 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 EXOC4Q96A65 974 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 MIS12Q9H081 205 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 GPBP1L1Q9HC44 474 aaPredicted RBP22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 XPNPEP3Q9NQH7 507 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 ST3GAL5Q9UNP4 418 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 PI4K2BG5E9Z4 385 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 PTGESO14684 152 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 RPS6KA5O75582 802 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 CCND3P30281 292 aaPredicted RBP22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 PLTPP55058 493 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 MTMR3Q13615 1198 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 ARHGAP17Q68EM7 881 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 LRIG3Q6UXM1 1119 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 SPOCD1Q6ZMY3 1216 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 SYDE1Q6ZW31 735 aaPredicted RBP22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 ZNF771Q7L3S4 317 aaPredicted RBP22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 OR6B3Q8NGW1 331 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 FAM204AQ9H8W3 233 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 GOLGA2P5Q9HBQ8 144 aa22.49■■□□□ 1.19
UBE2D3-216ENST00000503742 E5RJQ4 531 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 H0YGN5 161 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 ASGR1P07306 291 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 SETSIPP0DME0 302 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 LRPAP1P30533 357 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 TAF6P49848 677 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 DHX9Q08211 1270 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 ADCY2Q08462 1091 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 ACAP1Q15027 740 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 SPDYCQ5MJ68 293 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 ATL2Q8NHH9 583 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 GRK7Q8WTQ7 553 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 RAPGEF5Q92565 580 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 PPP1R10Q96QC0 940 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 FAM129AQ9BZQ8 928 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 PSD3Q9NYI0 1048 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 FEZ2Q9UHY8 353 aaPredicted RBP22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 PLAAQ9Y263 795 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 NFS1Q9Y697 457 aa22.48■■□□□ 1.19
UBE2D3-216ENST00000503742 AOC2O75106 756 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 RPLP2P05387 115 aaKnown RBP22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 FGFR1P11362 822 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 CST5P28325 142 aaPredicted RBP22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 KRT17Q04695 432 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 PPP1R7Q15435 360 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 FAM47CQ5HY64 1035 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 CRYBG2Q8N1P7 616 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 GOLGA6L1Q8N7Z2 621 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 SLC35F5Q8WV83 523 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 ART4Q93070 314 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 ARL8AQ96BM9 186 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 SLC4A5Q9BY07 1137 aa22.47■■□□□ 1.19
UBE2D3-216ENST00000503742 DPEP3Q9H4B8 488 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms