RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 COMMD8Q9NX08 183 aa18.4■□□□□ 0.54
CLDND1-209ENST00000503621 ABI2Q9NYB9 513 aaPredicted RBP18.4■□□□□ 0.54
CLDND1-209ENST00000503621 POLIQ9UNA4 740 aa18.4■□□□□ 0.54
CLDND1-209ENST00000503621 MRPS23Q9Y3D9 190 aaKnown RBP18.4■□□□□ 0.54
CLDND1-209ENST00000503621 LETM1O95202 739 aaPredicted RBP18.39■□□□□ 0.53
CLDND1-209ENST00000503621 AFPP02771 609 aaKnown RBP18.39■□□□□ 0.53
CLDND1-209ENST00000503621 HMGA1P17096 107 aaKnown RBP18.39■□□□□ 0.53
CLDND1-209ENST00000503621 DDX6P26196 483 aaKnown RBP eCLIP18.39■□□□□ 0.53
CLDND1-209ENST00000503621 CDC25CP30307 473 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 PPP3CCP48454 512 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 STX17P56962 302 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 GCNT1Q02742 428 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 NPAS3Q8IXF0 933 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 TTLL2Q9BWV7 592 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 NT5C1AQ9BXI3 368 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 SDCBP2Q9H190 292 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 CSNK1G1Q9HCP0 422 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 PNPLA8Q9NP80 782 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 KIAA1257Q9ULG3 409 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 SLC27A5Q9Y2P5 690 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 ATP8B3O60423 1300 aa18.39■□□□□ 0.53
CLDND1-209ENST00000503621 MOSPD3O75425 235 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 ACAT1P24752 427 aaKnown RBP18.38■□□□□ 0.53
CLDND1-209ENST00000503621 EEF1GP26641 437 aaKnown RBP18.38■□□□□ 0.53
CLDND1-209ENST00000503621 SLC5A9Q2M3M2 681 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 BMP8AQ7Z5Y6 402 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 TTC9BQ8N6N2 239 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 KIAA1958Q8N8K9 716 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 EDAQ92838 391 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 MYLPFQ96A32 169 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 CORO1BQ9BR76 489 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 C1QTNF1Q9BXJ1 281 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 KCNK12Q9HB15 430 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 HCFC1R1Q9NWW0 138 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 OBP2AQ9NY56 170 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 IL37Q9NZH6 218 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 NCANO14594 1321 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 MYO10Q9HD67 2058 aa18.38■□□□□ 0.53
CLDND1-209ENST00000503621 GPR37L1O60883 481 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 ATP2C2O75185 946 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 ECI2O75521 394 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 PDGFRBP09619 1106 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 CYP2F1P24903 491 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 NDST1P52848 882 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 CDH8P55286 799 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 MTMR3Q13615 1198 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 HTR4Q13639 388 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 STX1AQ16623 288 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 SPOPLQ6IQ16 392 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 SASS6Q6UVJ0 657 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 ENOSF1Q7L5Y1 443 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 UBR7Q8N806 425 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 EHBP1Q8NDI1 1231 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 ITFG1Q8TB96 612 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 WHAMMQ8TF30 809 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 OVCA2Q8WZ82 227 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 SMARCD1Q96GM5 515 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 CNOT6LQ96LI5 555 aaKnown RBP18.37■□□□□ 0.53
CLDND1-209ENST00000503621 SEPT5Q99719 369 aaPredicted RBP18.37■□□□□ 0.53
CLDND1-209ENST00000503621 HNRNPABQ99729 332 aaKnown RBP18.37■□□□□ 0.53
CLDND1-209ENST00000503621 BPIFA3Q9BQP9 254 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 PI4K2AQ9BTU6 479 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 IL21Q9HBE4 155 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 CNTN6Q9UQ52 1028 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 TRIOO75962 3097 aa18.37■□□□□ 0.53
CLDND1-209ENST00000503621 FAM92AA1XBS5 289 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 LRRC10BA6NIK2 292 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 TULP1O00294 542 aaPredicted RBP18.36■□□□□ 0.53
CLDND1-209ENST00000503621 F11P03951 625 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 GBP2P32456 591 aaPredicted RBP18.36■□□□□ 0.53
CLDND1-209ENST00000503621 CCR2P41597 374 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 NTHL1P78549 312 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 ZXDAP98168 799 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 TDGQ13569 410 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 CUL2Q13617 745 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 MAN2A1Q16706 1144 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 GREB1Q4ZG55 1949 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 GAREM2Q75VX8 874 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 ELSPBP1Q96BH3 223 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 NT5C1BQ96P26 610 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 UBXN6Q9BZV1 441 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 TRPV5Q9NQA5 729 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 SLC2A4RGQ9NR83 387 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 CISHQ9NSE2 258 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 LIMD1Q9UGP4 676 aa18.36■□□□□ 0.53
CLDND1-209ENST00000503621 DENND4CQ5VZ89 1909 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 HCRTO43612 131 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 PSMC1P62191 440 aaKnown RBP18.35■□□□□ 0.53
CLDND1-209ENST00000503621 SIGLEC14Q08ET2 396 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 MEA1Q16626 185 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 TPD52L1Q16890 204 aaPredicted RBP18.35■□□□□ 0.53
CLDND1-209ENST00000503621 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
CLDND1-209ENST00000503621 MDH1BQ5I0G3 518 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 ARHGAP17Q68EM7 881 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 PAQR9Q6ZVX9 377 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 GET4Q7L5D6 327 aaPredicted RBP18.35■□□□□ 0.53
CLDND1-209ENST00000503621 FUKQ8N0W3 1084 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 SHKBP1Q8TBC3 707 aa18.35■□□□□ 0.53
CLDND1-209ENST00000503621 ASB16Q96NS5 453 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms