RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SEC24CP53992 1094 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 INHBCP55103 352 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 FMO1Q01740 532 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 RAB32Q13637 225 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 HECTD2Q5U5R9 776 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 VWA1Q6PCB0 445 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 TMEM108Q6UXF1 575 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 Q6ZNX1 250 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 MRGPRGQ86SM5 289 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 CCAR1Q8IX12 1150 aaKnown RBP7.11□□□□□ -1.27
NIPBL-203ENST00000503274 SLC44A3Q8N4M1 653 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 LPIN2Q92539 896 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 MAML1Q92585 1016 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 ZNF518BQ9C0D4 1074 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 ZNF287Q9HBT7 754 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 SACM1LQ9NTJ5 587 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 STK32BQ9NY57 414 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 OGDHLQ9ULD0 1010 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 PAXBP1Q9Y5B6 917 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 TNIKQ9UKE5 1360 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 PROM1O43490 865 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 PRC1O43663 620 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 RAMP2O60895 175 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 CAND2O75155 1236 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 ESRRBO95718 433 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 GCP02774 474 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 PPP3CBP16298 524 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 CD6P30203 668 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 MPLP40238 635 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 PXNP49023 591 aaPredicted RBP7.1□□□□□ -1.27
NIPBL-203ENST00000503274 WNT3P56703 355 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 LOXL3P58215 753 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 FSTL1Q12841 308 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 MPP3Q13368 585 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 COBLL1Q53SF7 1204 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 RBM20Q5T481 1227 aaKnown RBP7.1□□□□□ -1.27
NIPBL-203ENST00000503274 MPP5Q8N3R9 675 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 B3GALNT2Q8NCR0 500 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 NMD3Q96D46 503 aaKnown RBP7.1□□□□□ -1.27
NIPBL-203ENST00000503274 NELL2Q99435 816 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 AMBRA1Q9C0C7 1298 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 NUP62CLQ9H1M0 184 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 TOR3AQ9H497 397 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 AFF4Q9UHB7 1163 aaKnown RBP7.1□□□□□ -1.27
NIPBL-203ENST00000503274 PACSIN3Q9UKS6 424 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 SHOC2Q9UQ13 582 aa7.1□□□□□ -1.27
NIPBL-203ENST00000503274 YY2O15391 372 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 PEX1O43933 1283 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 TRIM27P14373 513 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 ZKSCAN1P17029 563 aaPredicted RBP7.09□□□□□ -1.27
NIPBL-203ENST00000503274 RPL17P18621 184 aaKnown RBP7.09□□□□□ -1.27
NIPBL-203ENST00000503274 HNRNPMP52272 730 aaKnown RBP eCLIP7.09□□□□□ -1.27
NIPBL-203ENST00000503274 LILRA4P59901 499 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 TGFB2P61812 414 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 SATB1Q01826 763 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 ITIH3Q06033 890 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 SFRP4Q6FHJ7 346 aaPredicted RBP7.09□□□□□ -1.27
NIPBL-203ENST00000503274 TSHZ1Q6ZSZ6 1077 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 TOR1AIP2Q8NFQ8 470 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 SORCS2Q96PQ0 1159 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 PCGF6Q9BYE7 350 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 TPSD1Q9BZJ3 242 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 A1CFQ9NQ94 594 aaKnown RBP7.09□□□□□ -1.27
NIPBL-203ENST00000503274 FAM50BQ9Y247 325 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 ABCC10Q5T3U5 1492 aa7.09□□□□□ -1.27
NIPBL-203ENST00000503274 MAPKBP1O60336 1514 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 TRIM43BA6NCK2 446 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 PQBP1O60828 265 aaKnown RBP7.08□□□□□ -1.28
NIPBL-203ENST00000503274 RHOBTB3O94955 611 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 KRT18P05783 430 aaKnown RBP7.08□□□□□ -1.28
NIPBL-203ENST00000503274 FOLR3P41439 243 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 TBX4P57082 545 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 NXPH1P58417 271 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 PURAQ00577 322 aaKnown RBP7.08□□□□□ -1.28
NIPBL-203ENST00000503274 FOXI1Q12951 378 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 SAFBQ15424 915 aaKnown RBP eCLIP7.08□□□□□ -1.28
NIPBL-203ENST00000503274 MICU3Q86XE3 530 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 KRT78Q8N1N4 520 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 FAM109AQ8N4B1 249 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.08□□□□□ -1.28
NIPBL-203ENST00000503274 MYCBPAPQ8TBZ2 947 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 TRIM43Q96BQ3 446 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-203ENST00000503274 FAM136AQ96C01 138 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 FBXL20Q96IG2 436 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 PGBD1Q96JS3 809 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 MESP1Q9BRJ9 268 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 PTDSS2Q9BVG9 487 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 APOL5Q9BWW9 433 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 MS4A7Q9GZW8 240 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-203ENST00000503274 BTBD1Q9H0C5 482 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 RAPGEF2Q9Y4G8 1499 aa7.08□□□□□ -1.28
NIPBL-203ENST00000503274 TMEM233B4DJY2 109 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 LRPAP1P30533 357 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 C3orf38Q5JPI3 329 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 VPS53Q5VIR6 699 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 KSR2Q6VAB6 950 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 SESTD1Q86VW0 696 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 GAS2L3Q86XJ1 694 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 ACTRT3Q9BYD9 372 aa7.07□□□□□ -1.28
NIPBL-203ENST00000503274 ZSCAN32Q9NX65 697 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms