RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 SEPT5Q99719 369 aaPredicted RBP16.57■□□□□ 0.24
CPNE1-228ENST00000498814 LPIN3Q9BQK8 851 aa16.57■□□□□ 0.24
CPNE1-228ENST00000498814 VPS16Q9H269 839 aa16.57■□□□□ 0.24
CPNE1-228ENST00000498814 CBX8Q9HC52 389 aa16.57■□□□□ 0.24
CPNE1-228ENST00000498814 WDR6Q9NNW5 1121 aaKnown RBP16.57■□□□□ 0.24
CPNE1-228ENST00000498814 GREB1Q4ZG55 1949 aa16.57■□□□□ 0.24
CPNE1-228ENST00000498814 PES1O00541 588 aaKnown RBP16.56■□□□□ 0.24
CPNE1-228ENST00000498814 PTPN2P17706 415 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 CYP2F1P24903 491 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 COPB1P53618 953 aaKnown RBP16.56■□□□□ 0.24
CPNE1-228ENST00000498814 EPHB3P54753 998 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 RPL10AP62906 217 aaKnown RBP16.56■□□□□ 0.24
CPNE1-228ENST00000498814 CYP27A1Q02318 531 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 ELMOD1Q8N336 334 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 JAKMIP2Q96AA8 810 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 ZNF512Q96ME7 567 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-228ENST00000498814 PHF7Q9BWX1 381 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-228ENST00000498814 B3GNT5Q9BYG0 378 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 ELOVL4Q9GZR5 314 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 POMKQ9H5K3 350 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 CEP72Q9P209 647 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 DNMT3BQ9UBC3 853 aaKnown RBP16.56■□□□□ 0.24
CPNE1-228ENST00000498814 PRKAG3Q9UGI9 489 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 ASB3Q9Y575 518 aa16.56■□□□□ 0.24
CPNE1-228ENST00000498814 ATP8B3O60423 1300 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 CLUHO75153 1309 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 SOAT2O75908 522 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 ATP1A3P13637 1013 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 ATF6P18850 670 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 ACO1P21399 889 aaKnown RBP16.55■□□□□ 0.24
CPNE1-228ENST00000498814 RAD23BP54727 409 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 KCNMA1Q12791 1236 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 ORC1Q13415 861 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 SMYD5Q6GMV2 418 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 IQCEQ6IPM2 695 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 LRSAM1Q6UWE0 723 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 RRAGAQ7L523 313 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 ENOSF1Q7L5Y1 443 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 APTXQ7Z2E3 356 aaKnown RBP16.55■□□□□ 0.24
CPNE1-228ENST00000498814 GRASPQ7Z6J2 395 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-228ENST00000498814 ITIH5Q86UX2 942 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 FAM200AQ8TCP9 573 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 KAT5Q92993 513 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 UBE2TQ9NPD8 197 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-228ENST00000498814 AVENQ9NQS1 362 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-228ENST00000498814 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 APEX2Q9UBZ4 518 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 DOCK8Q8NF50 2099 aa16.55■□□□□ 0.24
CPNE1-228ENST00000498814 BDNFP23560 247 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 VEPH1Q14D04 833 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 ZNF394Q53GI3 561 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 FKBP15Q5T1M5 1219 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 DPY19L2P1Q6NXN4 242 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 PAQR9Q6ZVX9 377 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 LUZP1Q86V48 1076 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 FUKQ8N0W3 1084 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 C12orf29Q8N999 325 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 SLC4A11Q8NBS3 891 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 LEMD2Q8NC56 503 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 PSMG2Q969U7 264 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 TMEM176AQ96HP8 235 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 CEP295NLQ96MC4 621 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 KREMEN1Q96MU8 473 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 ZNF518BQ9C0D4 1074 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 SIX2Q9NPC8 291 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 DENND4CQ5VZ89 1909 aa16.54■□□□□ 0.24
CPNE1-228ENST00000498814 ZNF638Q14966 1978 aaKnown RBP16.53■□□□□ 0.24
CPNE1-228ENST00000498814 NCOR1O75376 2440 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 LGALS16A8MUM7 142 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 CLDN5O00501 218 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 RHOP08100 348 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 EPHA5P54756 1037 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 MFAP3P55082 362 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 ZNF445P59923 1031 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 TPM4P67936 248 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 NTHL1P78549 312 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 DDR2Q16832 855 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 PABPC1LQ4VXU2 614 aaKnown RBP16.53■□□□□ 0.24
CPNE1-228ENST00000498814 DNAJB7Q7Z6W7 309 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-228ENST00000498814 FAM35AQ86V20 835 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 SCN4BQ8IWT1 228 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 ADHFE1Q8IWW8 467 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 SPATA17Q96L03 361 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 C8orf48Q96LL4 319 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 HEXIM2Q96MH2 286 aaKnown RBP16.53■□□□□ 0.24
CPNE1-228ENST00000498814 HNRNPABQ99729 332 aaKnown RBP16.53■□□□□ 0.24
CPNE1-228ENST00000498814 CORO1BQ9BR76 489 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 FAM49BQ9NUQ9 324 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 CNTN6Q9UQ52 1028 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 USTQ9Y2C2 406 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 PCDHB4Q9Y5E5 795 aa16.53■□□□□ 0.24
CPNE1-228ENST00000498814 PATJQ8NI35 1801 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 GOLGA6L19H0YKK7 550 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 TRIM66O15016 1216 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 PAEPP09466 180 aa16.52■□□□□ 0.24
CPNE1-228ENST00000498814 CCDC130P13994 396 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms