RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 IFNAR1P17181 557 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 CEBPBP17676 345 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 HSPA4P34932 840 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 SCNN1AP37088 669 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 PI4KAP42356 2102 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 RAB27AP51159 221 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 SCNN1GP51170 649 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 RCAN1P53805 252 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 PSMC5P62195 406 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 CYP4A11Q02928 519 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 TOB2Q14106 344 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 CTTNQ14247 550 aaKnown RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 LRRC32Q14392 662 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 Q4G0T1 1027 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 PABPC1LQ4VXU2 614 aaKnown RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 XKR9Q5GH70 373 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 FAM78AQ5JUQ0 283 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 PPM1LQ5SGD2 360 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 UBXN11Q5T124 520 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 TXNDC11Q6PKC3 985 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 PRSS55Q6UWB4 352 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 VITQ6UXI7 678 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 CCNI2Q6ZMN8 369 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 Q6ZS46 218 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 ZNF410Q86VK4 478 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 TEX2Q8IWB9 1127 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 COLGALT2Q8IYK4 626 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 PNPLA1Q8N8W4 532 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 RNF149Q8NC42 400 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 PRPF31Q8WWY3 499 aaKnown RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 SLC7A3Q8WY07 619 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 DYDC2Q96IM9 177 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 CPB2Q96IY4 423 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 TRMT61BQ9BVS5 477 aaKnown RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 TRAIPQ9BWF2 469 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 EIF2AQ9BY44 585 aaKnown RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 GPR62Q9BZJ7 368 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 SLC32A1Q9H598 525 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 IFT122Q9HBG6 1241 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 TRPV5Q9NQA5 729 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 GJB4Q9NTQ9 266 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 AGPAT5Q9NUQ2 364 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 MIOSQ9NXC5 875 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 FNIP2Q9P278 1114 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 WRAP73Q9P2S5 460 aaPredicted RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 CACNG4Q9UBN1 327 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 DDX25Q9UHL0 483 aaKnown RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 FBXW11Q9UKB1 542 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 TRIM33Q9UPN9 1127 aa6.12□□□□□ -1.43
SPTA1-209ENST00000498708 MRPS23Q9Y3D9 190 aaKnown RBP6.12□□□□□ -1.43
SPTA1-209ENST00000498708 BSNQ9UPA5 3926 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 H0Y626 953 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 INO80B-WBP1J3KQ70 363 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 ARNTLO00327 626 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 GSC2O15499 205 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 ADAM12O43184 909 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 CCNT1O60563 726 aaKnown RBP6.11□□□□□ -1.43
SPTA1-209ENST00000498708 ZNF623O75123 536 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 KRT38O76015 456 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 ERLIN2O94905 339 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 TRIM16O95361 564 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 DEXIO95424 95 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 GLB1P16278 677 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 FSTP19883 344 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 AKAP5P24588 427 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 PSMA5P28066 241 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 MLH1P40692 756 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 VIPR2P41587 438 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 MAPK8P45983 427 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 QARSP47897 775 aaKnown RBP6.11□□□□□ -1.43
SPTA1-209ENST00000498708 CDC42EP1Q00587 391 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 LAMTOR4Q0VGL1 99 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 SEMA3BQ13214 749 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 B3GNT9Q6UX72 402 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 PIK3AP1Q6ZUJ8 805 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 CENPQQ7L2Z9 268 aaPredicted RBP6.11□□□□□ -1.43
SPTA1-209ENST00000498708 MAEAQ7L5Y9 396 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 TPH2Q8IWU9 490 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 SMG8Q8ND04 991 aaKnown RBP6.11□□□□□ -1.43
SPTA1-209ENST00000498708 RDM1Q8NG50 284 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 TTC8Q8TAM2 541 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 ETNPPLQ8TBG4 499 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 HASPINQ8TF76 798 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 PSPC1Q8WXF1 523 aaKnown RBP6.11□□□□□ -1.43
SPTA1-209ENST00000498708 TCEAL4Q96EI5 215 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 ZSWIM3Q96MP5 696 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 GAD1Q99259 594 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 CLSTN3Q9BQT9 956 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 JPH2Q9BR39 696 aaPredicted RBP6.11□□□□□ -1.43
SPTA1-209ENST00000498708 C22orf23Q9BZE7 217 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 GDE1Q9NZC3 331 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 RGL1Q9NZL6 768 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 PARP2Q9UGN5 583 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 KCNH3Q9ULD8 1083 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 INVSQ9Y283 1065 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 IPPQ9Y573 584 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 GON4LQ3T8J9 2241 aa6.11□□□□□ -1.43
SPTA1-209ENST00000498708 TDRD15B5MCY1 1934 aaKnown RBP6.11□□□□□ -1.43
SPTA1-209ENST00000498708 UBR5O95071 2799 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms