RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ZFYVE19Q96K21 471 aa17.24■□□□□ 0.35
NR1H3-227ENST00000498548 GCNAQ96QF7 691 aa17.24■□□□□ 0.35
NR1H3-227ENST00000498548 SNX25Q9H3E2 840 aa17.24■□□□□ 0.35
NR1H3-227ENST00000498548 MAGEC2Q9UBF1 373 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-227ENST00000498548 NDRG2Q9UN36 371 aaKnown RBP17.24■□□□□ 0.35
NR1H3-227ENST00000498548 KIF26AQ9ULI4 1882 aaPredicted RBP17.23■□□□□ 0.35
NR1H3-227ENST00000498548 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
NR1H3-227ENST00000498548 VNN1O95497 513 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 CSH1P0DML2 217 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 CSH2P0DML3 217 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 BDNFP23560 247 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 CDH8P55286 799 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 RPL10AP62906 217 aaKnown RBP17.23■□□□□ 0.35
NR1H3-227ENST00000498548 NUCB2P80303 420 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 CYP27A1Q02318 531 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 MDH1BQ5I0G3 518 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 TXNDC8Q6A555 127 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 FRMD5Q7Z6J6 570 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 SLC9A9Q8IVB4 645 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 MAB21L3Q8N8X9 362 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 DNASE1L2Q92874 299 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 XYLT2Q9H1B5 865 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 DPEP3Q9H4B8 488 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 COL4A2P08572 1712 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 GREB1Q4ZG55 1949 aa17.23■□□□□ 0.35
NR1H3-227ENST00000498548 PTPRDP23468 1912 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 RAP1GAPP47736 663 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 SOX9P48436 509 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 PNOCQ13519 176 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 ZNF852Q6ZMS4 543 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 SMYD4Q8IYR2 804 aaPredicted RBP17.22■□□□□ 0.35
NR1H3-227ENST00000498548 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
NR1H3-227ENST00000498548 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 SMYD3Q9H7B4 428 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 ABCB6Q9NP58 842 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.22■□□□□ 0.35
NR1H3-227ENST00000498548 TRAF3IP3Q9Y228 551 aa17.22■□□□□ 0.35
NR1H3-227ENST00000498548 A8MXQ7 604 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 ARNTLO00327 626 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 CLDN5O00501 218 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 CHADO15335 359 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 TACC1O75410 805 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 NOL4O94818 638 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 PTPN1P18031 435 aaKnown RBP17.21■□□□□ 0.35
NR1H3-227ENST00000498548 ATICP31939 592 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 GRIK1P39086 918 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 FZD5Q13467 585 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 NCOA4Q13772 614 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 CFAP221Q4G0U5 840 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 C1orf220Q5T0J3 134 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 SCARA5Q6ZMJ2 495 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 C4orf50Q6ZRC1 276 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 C1orf210Q8IVY1 113 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 FMR1NBQ8N0W7 255 aaPredicted RBP17.21■□□□□ 0.35
NR1H3-227ENST00000498548 CSGALNACT1Q8TDX6 532 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 SYAP1Q96A49 352 aaPredicted RBP17.21■□□□□ 0.35
NR1H3-227ENST00000498548 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 BCO2Q9BYV7 579 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 SDCBP2Q9H190 292 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 CCL26Q9Y258 94 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 FRMD4BQ9Y2L6 1034 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 PIAS3Q9Y6X2 628 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 CACNA1IQ9P0X4 2223 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 ANAPC1Q9H1A4 1944 aa17.21■□□□□ 0.35
NR1H3-227ENST00000498548 GOLGA6L4A6NEF3 574 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 GFRA3O60609 400 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 TADA3O75528 432 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 STAU1O95793 577 aaKnown RBP17.2■□□□□ 0.34
NR1H3-227ENST00000498548 CCNE1P24864 410 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 CLDN10P78369 228 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 KCNB1Q14721 858 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 ZNF699Q32M78 642 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 SPOPLQ6IQ16 392 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 ASCL5Q7RTU5 278 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 CMTM8Q8IZV2 173 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 BPIFB1Q8TDL5 484 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 FAM3CQ92520 227 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 MRPS31Q92665 395 aaKnown RBP17.2■□□□□ 0.34
NR1H3-227ENST00000498548 FUBP3Q96I24 572 aaKnown RBP eCLIP17.2■□□□□ 0.34
NR1H3-227ENST00000498548 CYP2S1Q96SQ9 504 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 OSBPL6Q9BZF3 934 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 MMRN2Q9H8L6 949 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 TRPC7Q9HCX4 862 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 TRPV5Q9NQA5 729 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 SPATA6Q9NWH7 488 aaPredicted RBP17.2■□□□□ 0.34
NR1H3-227ENST00000498548 GTSE1Q9NYZ3 720 aa17.2■□□□□ 0.34
NR1H3-227ENST00000498548 MAN2B1O00754 1011 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 AKAP3O75969 853 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 KIF20AO95235 890 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 NR2F2P24468 414 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 NBL1P41271 181 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 MAGEA11P43364 429 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 VAMP7P51809 220 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 KPNA1P52294 538 aaPredicted RBP17.19■□□□□ 0.34
NR1H3-227ENST00000498548 AP3M2P53677 418 aa17.19■□□□□ 0.34
NR1H3-227ENST00000498548 CACNA2D1P54289 1103 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms