RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 LUC7L2Q9Y383 392 aaKnown RBP12.17□□□□□ -0.46
CTTN-208ENST00000498223 NME7Q9Y5B8 376 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 XIRP2A4UGR9 3374 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 WDR27A2RRH5 827 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 F8VZ95 297 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 TGM5O43548 720 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 CALCAP01258 141 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 PAEPP09466 180 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 CCDC172P0C7W6 258 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 SRGAP2BP0DMP2 458 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 VDRP11473 427 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 BMP1P13497 986 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 CCDC130P13994 396 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 GNA15P30679 374 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 ADCY1Q08828 1119 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 SMARCB1Q12824 385 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 ASIC2Q16515 512 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 CCDC142Q17RM4 750 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 MGAT5BQ3V5L5 792 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 FIGNQ5HY92 759 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 LIN9Q5TKA1 542 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 SFMBT2Q5VUG0 894 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 CRYBG2Q8N1P7 616 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 C12orf29Q8N999 325 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 ATAD1Q8NBU5 361 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 ZNF461Q8TAF7 563 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 SPPL2BQ8TCT7 592 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 CYFIP2Q96F07 1278 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 CDCA3Q99618 268 aaPredicted RBP12.16□□□□□ -0.46
CTTN-208ENST00000498223 SEPT5Q99719 369 aaPredicted RBP12.16□□□□□ -0.46
CTTN-208ENST00000498223 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
CTTN-208ENST00000498223 EDEM3Q9BZQ6 932 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 TMLHEQ9NVH6 421 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 HESX1Q9UBX0 185 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 AFF4Q9UHB7 1163 aaKnown RBP12.16□□□□□ -0.46
CTTN-208ENST00000498223 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 SLC27A5Q9Y2P5 690 aa12.16□□□□□ -0.46
CTTN-208ENST00000498223 A0A1W2PQJ5 194 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 MTMR11A4FU01 709 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 RNF225M0QZC1 329 aaPredicted RBP12.15□□□□□ -0.46
CTTN-208ENST00000498223 CLDN5O00501 218 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 MED7O43513 233 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 EPCAMP16422 314 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 FERP16591 822 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 BDNFP23560 247 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 BRD2P25440 801 aaKnown RBP12.15□□□□□ -0.46
CTTN-208ENST00000498223 CASP14P31944 242 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
CTTN-208ENST00000498223 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.467e-7■■■■■ 33.5
CTTN-208ENST00000498223 KRT9P35527 623 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 PDE6CP51160 858 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 CLCN4P51793 760 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 DUSP4Q13115 394 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 DUSP6Q16828 381 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 GOLGA7BQ2TAP0 167 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 FAM171BQ6P995 826 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 CCDC149Q6ZUS6 474 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 SPC24Q8NBT2 197 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 KREMEN2Q8NCW0 462 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 SLC2A14Q8TDB8 520 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 C2orf15Q8WU43 125 aaKnown RBP12.15□□□□□ -0.46
CTTN-208ENST00000498223 HLA-CQ95604 372 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 PCED1BQ96HM7 432 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 B3GNT5Q9BYG0 378 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 NUCKS1Q9H1E3 243 aaKnown RBP12.15□□□□□ -0.46
CTTN-208ENST00000498223 MAN1C1Q9NR34 630 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 CAPN11Q9UMQ6 739 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 C2orf16Q68DN1 1984 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 PATJQ8NI35 1801 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 DENND4CQ5VZ89 1909 aa12.15□□□□□ -0.46
CTTN-208ENST00000498223 BDP1A6H8Y1 2624 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 AP1G2O75843 785 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 ABLIM3O94929 683 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 GYPCP04921 128 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 ATF2P15336 505 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 CYP2F1P24903 491 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 ANXA13P27216 316 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 CLCN1P35523 988 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 GRIK1P39086 918 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 KCNQ1P51787 676 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 JAM2P57087 298 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 SLC8A3P57103 927 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 ZBED6P86452 979 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 HYAL1Q12794 435 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 STILQ15468 1287 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 TAF12Q16514 161 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 PPM1LQ5SGD2 360 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 PPP1R26Q5T8A7 1209 aaPredicted RBP12.14□□□□□ -0.47
CTTN-208ENST00000498223 TAF3Q5VWG9 929 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 FAM35AQ86V20 835 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 FAM71AQ8IYT1 594 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 SLC7A14Q8TBB6 771 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 CASP10Q92851 521 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms