RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CNNM4Q6P4Q7 775 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 CBWD2Q8IUF1 395 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 WDR49Q8IV35 697 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 FOXD4L4Q8WXT5 416 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 HPS3Q969F9 1004 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 FUBP3Q96I24 572 aaKnown RBP eCLIP12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 HPDLQ96IR7 371 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 C7orf25Q9BPX7 421 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 SMG9Q9H0W8 520 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 GKN1Q9NS71 199 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 FAM13BQ9NYF5 915 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 SIX4Q9UIU6 781 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 GMEB2Q9UKD1 530 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 CFAP54Q96N23 3096 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 EP300Q09472 2414 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 GVINP1Q7Z2Y8 2422 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 UBE4BO95155 1302 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 GABRDO14764 452 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 C7P10643 843 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 TDGF1P13385 188 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 AMPD2Q01433 879 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 SATB1Q01826 763 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 TNK2Q07912 1038 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 PON2Q15165 354 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 MAPRE1Q15691 268 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 DDR2Q16832 855 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 SOWAHAQ2M3V2 549 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 CFAP221Q4G0U5 840 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 SDHAF4Q5VUM1 108 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 TXNDC8Q6A555 127 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 TXNDC11Q6PKC3 985 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 SHC4Q6S5L8 630 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 HS2ST1Q7LGA3 356 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 TMEM150AQ86TG1 271 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 MON1AQ86VX9 555 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 OSTM1Q86WC4 334 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 FSIP1Q8NA03 581 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 RMDN1Q96DB5 314 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 TRMT2BQ96GJ1 504 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 FAM84AQ96KN4 292 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 FNBP1Q96RU3 617 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 MMS19Q96T76 1030 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 RBM12Q9NTZ6 932 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 CDH9Q9ULB4 789 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 ZNF638Q14966 1978 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-211ENST00000497978 DENND4CQ5VZ89 1909 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 POLR2DO15514 142 aaKnown RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 NOL4O94818 638 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 ZSCAN22P10073 491 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 DLATP10515 647 aaKnown RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 TNNI1P19237 187 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 SDHBP21912 280 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 HOXD13P35453 343 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 MAGEA11P43364 429 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 ME1P48163 572 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 RUNX3Q13761 415 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 ZNF268Q14587 947 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 SNRNP35Q16560 246 aaKnown RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 FOXD4L6Q3SYB3 417 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 SCARA3Q6AZY7 606 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 FOXD4L3Q6VB84 417 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 UNC13DQ70J99 1090 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 EPM2AIP1Q7L775 607 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 DGLUCYQ7Z3D6 616 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 STKLD1Q8NE28 680 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 EXOC4Q96A65 974 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 MYRFLQ96LU7 910 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 PKMYT1Q99640 499 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 SYT15Q9BQS2 421 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 TRPC7Q9HCX4 862 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 AGPAT3Q9NRZ7 376 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 METRNQ9UJH8 293 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 CFAP45Q9UL16 551 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 PTPRJQ12913 1337 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 OTOGLQ3ZCN5 2332 aa12.59□□□□□ -0.39
NUDCD3-211ENST00000497978 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 CLIC2O15247 247 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 PAPSS2O95340 614 aaPredicted RBP12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 F13A1P00488 732 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 USP17L7P0C7H9 530 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 ANXA13P27216 316 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 CNR2P34972 360 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms