RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 PRAMEF12O95522 483 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 F11P03951 625 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
PPM1F-209ENST00000497072 CTHP32929 405 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 CXCL12P48061 93 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 GPR15P49685 360 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 CYP27A1Q02318 531 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 PSMD6Q15008 389 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 KNOP1Q1ED39 458 aaKnown RBP13.58□□□□□ -0.24
PPM1F-209ENST00000497072 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 MAMSTRQ6ZN01 415 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 OSTM1Q86WC4 334 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 CXorf38Q8TB03 319 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 SCFD1Q8WVM8 642 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 CCDC47Q96A33 483 aaKnown RBP13.58□□□□□ -0.24
PPM1F-209ENST00000497072 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
PPM1F-209ENST00000497072 ZFYVE19Q96K21 471 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 FAM84AQ96KN4 292 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 TRPC7Q9HCX4 862 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
PPM1F-209ENST00000497072 TDP1Q9NUW8 608 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 GTSE1Q9NYZ3 720 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 USP25Q9UHP3 1055 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 NCANO14594 1321 aa13.58□□□□□ -0.24
PPM1F-209ENST00000497072 TRAV19A0A0A6YYK7 116 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 NOL4O94818 638 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 SLFN14P0C7P3 912 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 CHRNB1P11230 501 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 WARSP23381 471 aaKnown RBP13.57□□□□□ -0.24
PPM1F-209ENST00000497072 CASP1P29466 404 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 HOXD13P35453 343 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 GNL1P36915 607 aaPredicted RBP13.57□□□□□ -0.24
PPM1F-209ENST00000497072 GRIK1P39086 918 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 MAGEA11P43364 429 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 ID4P47928 161 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 SOX9P48436 509 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 PDE6CP51160 858 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 KRT85P78386 507 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 PSMD2Q13200 908 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 FZD5Q13467 585 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 CUL4BQ13620 913 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 TXNDC8Q6A555 127 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 TSSK4Q6SA08 328 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 VSTM1Q6UX27 236 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 MON1AQ86VX9 555 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 C12orf56Q8IXR9 622 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 KIAA2013Q8IYS2 634 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 SPEM1Q8N4L4 309 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 OR6B3Q8NGW1 331 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 SYAP1Q96A49 352 aaPredicted RBP13.57□□□□□ -0.24
PPM1F-209ENST00000497072 CEP295NLQ96MC4 621 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
PPM1F-209ENST00000497072 GKN1Q9NS71 199 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 SERTAD1Q9UHV2 236 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 RCOR1Q9UKL0 485 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 PTPRJQ12913 1337 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 FAM186AA6NE01 2351 aa13.57□□□□□ -0.24
PPM1F-209ENST00000497072 SHISA7A6NL88 538 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 TRIM66O15016 1216 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 KIF20AO95235 890 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 MYL1P05976 194 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 CKMP06732 381 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 PDGFRBP09619 1106 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 FAM163BP0C2L3 166 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 USP17L7P0C7H9 530 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 ATICP31939 592 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 AP3M2P53677 418 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 PSMC1P62191 440 aaKnown RBP13.56□□□□□ -0.24
PPM1F-209ENST00000497072 FOXK2Q01167 660 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 EHHADHQ08426 723 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 GRSF1Q12849 480 aaKnown RBP eCLIP13.56□□□□□ -0.24
PPM1F-209ENST00000497072 BIRC3Q13489 604 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 RUNX3Q13761 415 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 ZNF268Q14587 947 aaPredicted RBP13.56□□□□□ -0.24
PPM1F-209ENST00000497072 KCNB1Q14721 858 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 PON2Q15165 354 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 BMT2Q1RMZ1 405 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 WDR72Q3MJ13 1102 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 FAM171BQ6P995 826 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 GPR161Q8N6U8 529 aaKnown RBP13.56□□□□□ -0.24
PPM1F-209ENST00000497072 ZBTB44Q8NCP5 570 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 MYLPFQ96A32 169 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 SPATA32Q96LK8 384 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 MYRFLQ96LU7 910 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 LRRC3BQ96PB8 259 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 PKMYT1Q99640 499 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 GMEB2Q9UKD1 530 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 ZNF638Q14966 1978 aaKnown RBP13.56□□□□□ -0.24
PPM1F-209ENST00000497072 FANCMQ8IYD8 2048 aa13.56□□□□□ -0.24
PPM1F-209ENST00000497072 DMDP11532 3685 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 RIF1Q5UIP0 2472 aaKnown RBP13.55□□□□□ -0.24
PPM1F-209ENST00000497072 VPS13AQ96RL7 3174 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 F5P12259 2224 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 ATP2C2O75185 946 aa13.55□□□□□ -0.24
PPM1F-209ENST00000497072 TACC1O75410 805 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms