RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ABI2Q9NYB9 513 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-222ENST00000496567 MTCH2Q9Y6C9 303 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 THAP12O43422 761 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 MFAP3LO75121 409 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 IGFBP4P22692 258 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 NRIP1P48552 1158 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 CLCN4P51793 760 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 ARID5AQ03989 594 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 ADCY1Q08828 1119 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 ASIC2Q16515 512 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 CCDC142Q17RM4 750 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 PPP1R26Q5T8A7 1209 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-222ENST00000496567 LILRA6Q6PI73 481 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 OR8K1Q8NGG5 319 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 SLC2A14Q8TDB8 520 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 B3GNT5Q9BYG0 378 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 HSFX1Q9UBD0 423 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 DPP7Q9UHL4 492 aa23.1■■□□□ 1.29
C9orf3-222ENST00000496567 PER2O15055 1255 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 CCDC130P13994 396 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 CYP11B1P15538 503 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 BRD2P25440 801 aaKnown RBP23.09■■□□□ 1.29
C9orf3-222ENST00000496567 ADGRE1Q14246 886 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 CNGA2Q16280 664 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 FUKQ8N0W3 1084 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 ATAD1Q8NBU5 361 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 ZNF606Q8WXB4 792 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 TFAP2BQ92481 460 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 ACP6Q9NPH0 428 aa23.09■■□□□ 1.29
C9orf3-222ENST00000496567 O00370 1275 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 ARID5BQ14865 1188 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 TCEAL5Q5H9L2 206 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 ELMSAN1Q6PJG2 1045 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 Q7L0L9 218 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 IRF2BP2Q7Z5L9 587 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 ZNF677Q86XU0 584 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 DEFB123Q8N688 67 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 SPC24Q8NBT2 197 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 EPS8L1Q8TE68 723 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 DNAJC7Q99615 494 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 ZNHIT6Q9NWK9 470 aaKnown RBP23.08■■□□□ 1.29
C9orf3-222ENST00000496567 HESX1Q9UBX0 185 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 MYO7AQ13402 2215 aa23.08■■□□□ 1.29
C9orf3-222ENST00000496567 CDH23Q9H251 3354 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 BDNFP23560 247 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 ADORA2BP29275 332 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 TUFMP49411 452 aaKnown RBP23.07■■□□□ 1.28
C9orf3-222ENST00000496567 ADKP55263 362 aaKnown RBP23.07■■□□□ 1.28
C9orf3-222ENST00000496567 DUSP4Q13115 394 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 LCLAT1Q6UWP7 414 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 VSTM1Q6UX27 236 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 FAM35AQ86V20 835 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 TCEAL8Q8IYN2 117 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 KREMEN2Q8NCW0 462 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 SLC22A17Q8WUG5 538 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 HDAC7Q8WUI4 952 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 SMARCD1Q96GM5 515 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 PLEKHA4Q9H4M7 779 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 CYP4F11Q9HBI6 524 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 ABHD10Q9NUJ1 306 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 FBXW11Q9UKB1 542 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 TSPAN16Q9UKR8 245 aa23.07■■□□□ 1.28
C9orf3-222ENST00000496567 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.07■■□□□ 1.28
C9orf3-222ENST00000496567 BZW2Q9Y6E2 419 aaKnown RBP23.07■■□□□ 1.28
C9orf3-222ENST00000496567 CLDN5O00501 218 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 VNN2O95498 520 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 CALCAP01258 141 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 HNRNPH3P31942 346 aaKnown RBP23.06■■□□□ 1.28
C9orf3-222ENST00000496567 PRKCIP41743 596 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 MAGEA11P43364 429 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 SLC8A3P57103 927 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 MEA1Q16626 185 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 CCDC149Q6ZUS6 474 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 PAQR9Q6ZVX9 377 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 RTL10Q7L3V2 364 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 ANKRD52Q8NB46 1076 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 CDX2Q99626 313 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-222ENST00000496567 ZSWIM1Q9BR11 485 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 ZNF518BQ9C0D4 1074 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 HCFC2Q9Y5Z7 792 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 PRRG1O14668 218 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 FAM200BP0CF97 657 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 CYP2F1P24903 491 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 CDR1P51861 262 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 KLHL30Q0D2K2 578 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 GOLGA7BQ2TAP0 167 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 MGAT5BQ3V5L5 792 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 LIN9Q5TKA1 542 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 NOP9Q86U38 636 aaKnown RBP23.06■■□□□ 1.28
C9orf3-222ENST00000496567 GPIHBP1Q8IV16 184 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 PDCL3Q9H2J4 239 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 PCDHGC3Q9UN70 934 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 SLC27A5Q9Y2P5 690 aa23.06■■□□□ 1.28
C9orf3-222ENST00000496567 PLXNA3P51805 1871 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 AP1G2O75843 785 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 SEC24AO95486 1093 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 SPATA31D3P0C874 917 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 HAPLN1P10915 354 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-222ENST00000496567 EPCAMP16422 314 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 DEKP35659 375 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms