RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 KCTD1Q719H9 257 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 ZNF765Q7L2R6 523 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 OTOP3Q7RTS5 596 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 OVCH2Q7RTZ1 564 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 FAM160B2Q86V87 743 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 TBC1D10CQ8IV04 446 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 ANKRD35Q8N283 1001 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 PLEKHO2Q8TD55 490 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 CLEC4DQ8WXI8 215 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 TMEM169Q96HH4 297 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 MSLNLQ96KJ4 702 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 C16orf92Q96LL3 132 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 RIPOR3Q96MK2 946 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 CDADC1Q9BWV3 514 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.9□□□□□ -1.63
VPS52-222ENST00000495981 DCTPP1Q9H773 170 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 MKNK2Q9HBH9 465 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 SEMA3GQ9NS98 782 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 SRPK3Q9UPE1 567 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 X6R8D5 127 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 WDR19Q8NEZ3 1342 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 KMT2EQ8IZD2 1858 aa4.9□□□□□ -1.63
VPS52-222ENST00000495981 CNOT1A5YKK6 2376 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 A0A0D9SFI3 127 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ASB14A6NK59 587 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 GRM6O15303 877 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 SH3BP5O60239 455 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ZBED4O75132 1171 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 TCEA3O75764 348 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 CABYRO75952 493 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ARIH2O95376 493 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ZBED1O96006 694 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 HRGP04196 525 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 PFKMP08237 780 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 TSPY3P0CV98 308 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 TSPY8P0CW00 308 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 SNHG28P0DPA3 235 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 PDHBP11177 359 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ALAS1P13196 640 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ENPP1P22413 925 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 SLC1A4P43007 532 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ADKP55263 362 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 RRP1P56182 461 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 TFAP4Q01664 338 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 SMAD4Q13485 552 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 CAMK1Q14012 370 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ZRSR2Q15696 482 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 ZNF174Q15697 407 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 DUSP28Q4G0W2 176 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 FIGNQ5HY92 759 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 CDKAL1Q5VV42 579 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 BTNL9Q6UXG8 535 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 CYP2R1Q6VVX0 501 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 CEP68Q76N32 757 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 ZNF589Q86UQ0 364 aaPredicted RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 CXorf67Q86X51 503 aaPredicted RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 TEX2Q8IWB9 1127 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 GIMAP7Q8NHV1 300 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 PPP1R35Q8TAP8 253 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 PIP4K2CQ8TBX8 421 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 SCARF2Q96GP6 870 aaPredicted RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 CHAMP1Q96JM3 812 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 RPGRIP1Q96KN7 1286 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 HSPA12BQ96MM6 686 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 FAM83CQ9BQN1 747 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 MTA3Q9BTC8 594 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 SSBP4Q9BWG4 385 aaPredicted RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 CD244Q9BZW8 370 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 NAPBQ9H115 298 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 TRIT1Q9H3H1 467 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 KCNF1Q9H3M0 494 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 RSAD1Q9HA92 442 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 INCENPQ9NQS7 918 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 DNAJC28Q9NX36 388 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 PUF60Q9UHX1 559 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 PNMA2Q9UL42 364 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 CCPG1Q9ULG6 757 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 PLAGL2Q9UPG8 496 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 Q9Y3F1 56 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 TELO2Q9Y4R8 837 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 GPR45Q9Y5Y3 372 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 DOCK5Q9H7D0 1870 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 NEDD4P46934 1319 aa4.89□□□□□ -1.63
VPS52-222ENST00000495981 DSPP15924 2871 aaKnown RBP4.89□□□□□ -1.63
VPS52-222ENST00000495981 C9orf172C9J069 976 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 H3BNC9 293 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 H3BS24 57 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 RNF225M0QZC1 329 aaPredicted RBP4.88□□□□□ -1.63
VPS52-222ENST00000495981 SCDO00767 359 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 NRDCO43847 1150 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 PIP5K1CO60331 668 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 NPHS1O60500 1241 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 CLASP2O75122 1294 aaKnown RBP4.88□□□□□ -1.63
VPS52-222ENST00000495981 OFD1O75665 1012 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 ESR1P03372 595 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 MYL3P08590 195 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 GNAT1P11488 350 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 ACTN1P12814 892 aa4.88□□□□□ -1.63
VPS52-222ENST00000495981 OSMP13725 252 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms